Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 83/340 (24%), Positives = 132/340 (38%), Gaps = 28/340 (8%)

Query: 8   KALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGV 67
           K     A   A+G+S  +QA   +K+G+   ++G  A         A    ++INA GGV
Sbjct: 8   KGFLALAVATALGVSSYVQA--DVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGV 65

Query: 68  NGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFY 127
           NG+ +  V  D A         + +L+ QDKV  V G + S +      V++E   +   
Sbjct: 66  NGEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAIT 125

Query: 128 PVQYE---GEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNK 184
           P        E     +F      +QQ I A +Y++  D    K+  +L     Y +    
Sbjct: 126 PGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIV--DVLKGKKVAVLHDKDTYGQGLAD 183

Query: 185 ILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFYK 244
             +A L  +GV  K +       G  D+  +V  I+  S G        ++ ++  P  +
Sbjct: 184 ATKAQLEKRGV--KPVLYEGLTRGEKDFSAVVTKIR--STGADVVYFGGLHPEAG-PLVR 238

Query: 245 ELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWKAY 304
           +L  QGLK  DV  ++         GI T  LV       Y +     V   F AD +  
Sbjct: 239 QLREQGLK--DVKFMSDD-------GIVTDELVSTAGGAQYVDG----VYMTFGADPRLL 285

Query: 305 AKAKGLPGADKAVTNDPMEAT---YVGIHMWAQAVEKAKS 341
             +K +    +    +P   T   Y  +   A A   AKS
Sbjct: 286 PDSKAVVEEFRKAGTEPEGYTLYAYASLQALAAAFNGAKS 325