Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 96/368 (26%), Positives = 146/368 (39%), Gaps = 41/368 (11%)

Query: 6   LIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDM----ALMTIEQI 61
           +IK   L A++   G++    AA+TIK+GI    +G +    T   DM    A   I+ I
Sbjct: 1   MIKISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPV----TQYGDMQFIGAKQAIKDI 56

Query: 62  NAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEEL 121
           NA GGV+GKMLE    D A + P  A      +  D V  V G   S S +    ++E+ 
Sbjct: 57  NAAGGVDGKMLEAKEYDDACD-PKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDE 115

Query: 122 NGLLFYPVQYEGEEMSPN---VFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVY 178
             ++  P     E  +     +F T    + Q   A  Y+   D    K   +L     Y
Sbjct: 116 GVIMITPAATSPEITARGYKLIFRTIGLDSAQGPAAGNYIA--DHVKPKVVAVLHDKQQY 173

Query: 179 PRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSA-----GGKTAVIST 233
                  ++  L SKG      E +    G  D+ +I+  +K+ +      GG    +  
Sbjct: 174 GEGIATAVKQTLESKGTKVAVFEGLNA--GDKDFSSIIQKLKQNNVDFVYYGGYHPELGL 231

Query: 234 VNGDSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPV 293
           +         ++   +GLKA  +      VG + +  I      G L         D P 
Sbjct: 232 I--------LRQAQEKGLKAKFMGPEG--VGNDSISQIAQNASEGLLVTLPKSFDAD-PA 280

Query: 294 NQKFVADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAG 353
           N+K V   KA  K    P    A         Y  + + AQ ++KA S D DKV EA+  
Sbjct: 281 NKKIVDAIKADGKDPSGPFVFPA---------YSAVELIAQGIKKAGSDDTDKVAEAIHK 331

Query: 354 QSFEAPSG 361
            +F+ P+G
Sbjct: 332 GTFKTPTG 339