Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 384 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 94/384 (24%), Positives = 158/384 (41%), Gaps = 56/384 (14%)

Query: 1   MKRRSLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQ 60
           M++R+ +K +  + ++ A     ++ A +TIK+  +  LSG  A + T+ K+   + +++
Sbjct: 1   MQKRTTLKLMAAAVAVLA---GTAVHAQQTIKIANIVELSGGGATAGTNFKNGVELAVKE 57

Query: 61  INAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFG--------CWTSVSRK 112
           INA GG+ GK +E V  D  SN P  A+   Q    D V  +FG           + SR+
Sbjct: 58  INAAGGILGKKIETVTSDTQSN-PGVAKGLTQKAVDDDVFAIFGPVFSGSIMVSMAESRR 116

Query: 113 SVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLL 172
           + +P      G     +  +G   +P VF T +     A+P V   ++     +K   +L
Sbjct: 117 AEVP---NWTGGEAASITQQG---NPYVFRT-SFTQATAMPKVARYINT---KSKNIAVL 166

Query: 173 GTDYVYPRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVIS 232
             +  + +    +++  L +     K   EV T  G  D+   V   K     G  AV  
Sbjct: 167 YVNNDFGKGGLDMIKKALANS--PTKIAAEVSTEPGQVDWSAAVLRAKN---SGADAVFV 221

Query: 233 TVNGDSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHL---AAWNYFESV 289
             N + +    +EL  QG    D P+    +GE  L G     L G     A  +   +V
Sbjct: 222 YTNEEESARALRELRKQG---WDKPI----IGETTLTGQKVIELAGDAANGAVAHVGLTV 274

Query: 290 DNPVNQ------KFVADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTD 343
           D P+ +      KF  D+K  +   G+ G             Y G++    A+EK    D
Sbjct: 275 DAPIPEMLKFKAKFYQDYKYVSDHNGIKG-------------YTGVYSLKAAIEKVGKLD 321

Query: 344 VDKVREALAGQSFEAPSGFTLTMD 367
              V +A+ G +  A     + MD
Sbjct: 322 RKAVAQAMKGLTISAKKYPGVIMD 345