Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 366 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 98/367 (26%), Positives = 140/367 (38%), Gaps = 41/367 (11%)

Query: 4   RSLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINA 63
           R+ I  +TL+A++   G      A   I +G+   LSG+ A      K  A+  +E INA
Sbjct: 3   RTGITGITLAAALLMAGA-----ARADITIGVAGPLSGSEAAFGEQFKRGAMKAVEDINA 57

Query: 64  KGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNG 123
           KGGV G+ L   + D A + P  A      +   KV  V G + S S      V+ E   
Sbjct: 58  KGGVLGQKLALTLGDDACD-PKQAVAVANEMAAKKVPFVAGHFCSGSSIPASEVYAETGI 116

Query: 124 LLFYPVQYE---GEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPR 180
           L   P        E   PN+F T    +QQ + A +Y+        K   ++     Y +
Sbjct: 117 LQISPASTNPKFTERGLPNIFRTCGRDDQQGVIAADYIAKHQ--KDKVVAIVHDKSAYGK 174

Query: 181 TTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKK------FSAGGKTAVISTV 234
                 R  L   G+     E +    G  DY  +V  +K       +  G KT     V
Sbjct: 175 GLADQTRDALGKAGIKAALYEAISA--GEKDYSALVTKLKASKVDLLYFGGYKTEAGLIV 232

Query: 235 NGDSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVN 294
                    ++L +QG++   +   A     EE   I      G +  ++  +   NP N
Sbjct: 233 ---------RQLRDQGMQTRLMGGDALVT--EEYWAITGAAGEGTMMTFSP-DPRKNPAN 280

Query: 295 QKFVADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQ 354
              V   K Y   K  P A           TY  I  WAQA EKAK+TD  KV   L  +
Sbjct: 281 ADLV---KYYRAQKYEPEAYTLY-------TYGTIQAWAQAAEKAKTTDWKKVAAVLKAE 330

Query: 355 SFEAPSG 361
            F+   G
Sbjct: 331 KFDTAIG 337