Pairwise Alignments

Query, 468 a.a., D-alanine, beta-alanine, D-serine, glycine permease from Pseudomonas putida KT2440

Subject, 472 a.a., Uncharacterized amino acid permease YtnA from Pseudomonas putida KT2440

 Score =  395 bits (1014), Expect = e-114
 Identities = 200/450 (44%), Positives = 288/450 (64%), Gaps = 4/450 (0%)

Query: 8   ATDEPHLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMR 67
           AT+   L+R L  RHI+L+A+G  IG GLF+GS K I +AGP+I+  Y+I G  +  +MR
Sbjct: 12  ATEGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMR 71

Query: 68  AMGELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQFWFPD 127
           A+GE+ + N    SF  ++ D LGP AG+ TGW YWF W+VT +A++ A+A Y   WFPD
Sbjct: 72  ALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAIYMGIWFPD 131

Query: 128 LPQWIPALTCVGLLLSLNLVTVKMFGELEFWFALVKIVAILGLVATGLYMVITGFTSPSG 187
           +P+WI AL  +G + ++NLV VK FGE EFWFAL+KIV I+ +V  G+ ++  GF +  G
Sbjct: 132 VPRWIWALAALGSMGAVNLVAVKAFGEFEFWFALIKIVTIIAMVLGGIGIIAFGFGN-DG 190

Query: 188 RTAQLANLWNDGGMFPHGLMGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRAINSI 247
               ++NLW++GG  P+G+ G     Q+ +FA++G+E++G TA EA+NP++T+P+AI S+
Sbjct: 191 VAVGISNLWSNGGFMPNGVTGVLMSLQMVMFAYLGVEMIGLTAGEARNPQKTIPQAIGSV 250

Query: 248 PIRIIVFYVLALIAIMAVTPWRDVVPGKSPFVELFVLAGLPAAASIINFVVLTSAASSAN 307
             RI++FYV AL  I+++ PW ++    SPFV  F   G+  AA IINFVV+T+A SS N
Sbjct: 251 FWRILLFYVGALFVILSIYPWNEIGSQGSPFVMTFERLGIKTAAGIINFVVITAALSSCN 310

Query: 308 SGVFSTSRMLYGLSQEGDAPKAFEKLSSRSVPANGLYFSCTCLLLGAVLIYLVPNVVEAF 367
            G+FST RMLY L+Q G AP AF + S   VP N L  S   LLLG +  YLVP  V  F
Sbjct: 311 GGIFSTGRMLYSLAQNGQAPAAFARTSKNGVPRNALLLSIGALLLGVLANYLVPEKV--F 368

Query: 368 TLVTTVSAVLFMFVWTLILLSYLKYRKD-RAALHQASNYKMPGGRFMCYVCLSFFAFILV 426
             VT+++    ++ W +ILL+ LK+R     A  +A  Y+M       Y+ L+F   ++ 
Sbjct: 369 VWVTSIATFGAIWTWVMILLAQLKFRAGLTTAERKALKYRMWLWPLSSYLALAFLVLVVG 428

Query: 427 LLSLEADTRSALVVTPIWFVVLAVTYQLVR 456
           L++   DTR AL + P + V+L V Y   R
Sbjct: 429 LMAYFEDTRVALYIGPAFLVLLTVLYYTFR 458