Pairwise Alignments

Query, 198 a.a., Membrane protein, MarC family from Pseudomonas putida KT2440

Subject, 224 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 75.1 bits (183), Expect = 9e-19
 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 33/212 (15%)

Query: 8   VYLKMLVLYSPFFVLSCFISLTRGHSSKERKQLAWKVAFAALVASVLLYLFGRAIFGIFG 67
           V+  +  + +P  ++  F+SLT    + +++ +   +        ++  L GRA+   FG
Sbjct: 21  VFAALFAIMNPLTIMPVFLSLTADKPAADQRSIMLTLNATVAAGCLICALGGRAVLSAFG 80

Query: 68  ITADAFRIGAGSVLFISALGMAQGK---------PAVQADNVQQDVTIVPLTIPLTVGPG 118
           I  + F++  G ++ + AL M  G+            +  N    + + PL IPL +GPG
Sbjct: 81  IDVNHFQLAGGLIVLLLALSMLSGEDHSAHSGTAEEKKTYNSASSLGVYPLGIPLALGPG 140

Query: 119 TIGALLV---MGVSQPHWDEKLLAIVSIALASFTVGLVLYL---------SHGIERLLGD 166
           ++ A++V   MG S+P               SF +GLV Y+         +  + R L  
Sbjct: 141 SMTAIIVFSQMGASRPG-----------GTVSFYLGLVGYVVFFSICMASAPLLARFLSP 189

Query: 167 QGLQIVSRLMGLFVCALAAQIIFTGIRGYLLP 198
             L I  RLMG+ + A+A ++I T + G++ P
Sbjct: 190 NALSISKRLMGIVLAAIAMEMISTAL-GHIFP 220