Pairwise Alignments

Query, 198 a.a., Membrane protein, MarC family from Pseudomonas putida KT2440

Subject, 221 a.a., NAAT family transporter MarC from Escherichia coli ECRC100

 Score = 70.5 bits (171), Expect = 2e-17
 Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 18/199 (9%)

Query: 12  MLVLYSPFFVLSCFISLTRGHSSKERKQLAWKVAFAALVASVLLYLFGRAIFGIFGITAD 71
           +L L +P   ++ F+ L    +  ER + +   +       ++ Y  G+ +   FGI+  
Sbjct: 15  LLPLANPLTTVALFLGLAGNMNGAERNRQSLMASVYVFAIMMVAYYAGQLVMDTFGISIP 74

Query: 72  AFRIGAGSVLFISALGM------------AQGKPAVQADNVQQDVTIVPLTIPLTVGPGT 119
             RI  G ++      M            A+ K     D    ++  VPL +P T GPGT
Sbjct: 75  GLRIAGGLIVAFIGFRMLFPQQKAIDSPEAKSKSEELEDEPSANIAFVPLAMPSTAGPGT 134

Query: 120 IGALLVMG--VSQPHWDEKLLAIVSIALASFTVGLVLY----LSHGIERLLGDQGLQIVS 173
           I  ++     V Q       + +V+  L  F V ++L+     S  I RL+G  G++ +S
Sbjct: 135 IAMIISSASTVRQSSTFADWVLMVAPPLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAIS 194

Query: 174 RLMGLFVCALAAQIIFTGI 192
           RLMG  +  +  Q I  GI
Sbjct: 195 RLMGFLLVCMGVQFIINGI 213