Pairwise Alignments

Query, 198 a.a., Membrane protein, MarC family from Pseudomonas putida KT2440

Subject, 209 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 90.9 bits (224), Expect = 1e-23
 Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 9/198 (4%)

Query: 5   LFSVYLKMLVLYSPFFVLSCFISLTRGHSSKERKQLAWKVAFAALVASVLLYLFGRAIFG 64
           L +    +LV   P  +   F++LT G +  +R Q+A + +  A     +  LFG AI  
Sbjct: 7   LINALTTLLVTLDPPGLAPVFLALTVGMTRDQRSQVALRGSIIAFGILAVFALFGLAILN 66

Query: 65  IFGITADAFRIGAGSVLFISALGMAQGKPAVQADNVQQ---------DVTIVPLTIPLTV 115
           + GI+  AFRI  G +LF  +  M   K   + +   +         ++ + PL +PL  
Sbjct: 67  LLGISLGAFRIAGGLLLFWISFEMIFEKRQERKEKTSEIAITKDHLHNLAVFPLALPLIA 126

Query: 116 GPGTIGALLVMGVSQPHWDEKLLAIVSIALASFTVGLVLYLSHGIERLLGDQGLQIVSRL 175
           GPG I A +++  S     E ++ I+ +A A   V   L +S  ++R LG+ G  I++RL
Sbjct: 127 GPGAISATVLLAGSMKTTVEMVVLILILAFAMALVYAALIVSERMDRFLGNTGRAILTRL 186

Query: 176 MGLFVCALAAQIIFTGIR 193
           +G+ + AL+ Q +  GI+
Sbjct: 187 LGVLLAALSVQFVVDGIK 204