Pairwise Alignments

Query, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 796 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  217 bits (553), Expect = 2e-60
 Identities = 223/792 (28%), Positives = 356/792 (44%), Gaps = 79/792 (9%)

Query: 33  VLLDEQANLQLSDVRSERYRNQFSPLPLADLDAAPAGQALWLHYRL------APGDQEQL 86
           VL D    L ++DV +     QF P     L+A  +    WL   L      A   +  L
Sbjct: 36  VLEDPTDALTIADVSAPSATPQFKPHDKDTLNAGYSRSVFWLKVNLHYLPTQAEAQRTWL 95

Query: 87  LRVFAPDLSGLDLYALEGEQLLRQLHHGRQAGNASP----TLRGSDHVLPLPNSR-QPLD 141
           L +  P L  LDLY  +     R    GR  G+A P     +R ++++  +  +  +   
Sbjct: 96  LELAYPPLDHLDLYLPDSSGTYRLA--GR-TGDALPFSAREIRQNNYLFKVDFAPGEAKT 152

Query: 142 IYLRLVSEHQLRPAISLEPAAEAASDQRQPL---LFGMLFGGLIMLIMHNLIRFLYTRSS 198
           +YLRL SE  ++  ++L   +  A  ++QPL   + G+++G L+ ++++NL  +L  R +
Sbjct: 153 VYLRLQSEGSIQAPLTLW--SSTAYLEQQPLRLYVLGLIYGVLLGMLVYNLFIYLSVRDT 210

Query: 199 TTLILALYHGLMLLSGLILLNLSG----------PWWHVWHSAQTPAAYLTLVLAGLSGL 248
           + L    Y   +   G+  L+++G          PWW    +A TP     +  A L G 
Sbjct: 211 SYLYYIFY---IASFGMYQLSVNGAAVEYFWPNNPWWA---NAATP---FLIGSAALFGS 261

Query: 249 YFTQHFFSPCNSPR-LNRLLQGEMLIVGLSGLVLLFVDTLPLNLMT-YAL---MALG--- 300
            F + F       R +NRLL   + +V   G+V+L      L+LMT YAL   +A G   
Sbjct: 262 LFARSFLHTAQHSRWINRLL---LALVACGGVVML------LSLMTSYALALRLATGLAL 312

Query: 301 --SVSMLLVSSYHWYKGYAPGRLFSLAMVVFNLGGLVLLPALLGLTRTSTPWLLCILLGL 358
             +V++ + +   WY G    R F +A   F LGG+V    +LG        +    +G 
Sbjct: 313 VFTVTIFVAAIKAWYCGQRVARYFIIAWSAFLLGGVVNTLMVLGYLPNVFLTMYASQIG- 371

Query: 359 TVVSGLLLNLAVSERLRRISEER----FSASRALAASDAEI----NAKAEFLAKISHEIR 410
           + +   LL+LA+++R+  + E++    F AS+ L   + ++      K EFLA ++HE+R
Sbjct: 372 SAIEVALLSLALADRINSMREQQAQILFDASQKLEVLNQQLARSNRLKDEFLATLTHELR 431

Query: 411 TPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLINEILDISKLESRQIELDDVQ 470
           TPMNGV+G  EL+   PL      Y QT   +  +++ ++N IL +++L++ ++      
Sbjct: 432 TPMNGVIGSLELMQTVPLDADLAQYHQTAAGSARDMMRMVNGILTLTELQAGRLSAQPQV 491

Query: 471 FDLNALIEDCLNIFRAKAEQQNIELISFTQPQVPRVISGDPTRLRQALSSLLENALKNTD 530
           F L   ++     F A A+ + +        ++P  + GD  +L Q+L  LL+NA K T 
Sbjct: 492 FSLRGTLDTLRQQFTANAQSKGLAFSIDVADELPDRVLGDADKLLQSLDCLLDNAFKFTH 551

Query: 531 QGEI-LLVVALDQRGEVPRLRIAVQDSGEPLPAADREALLQAELHSHHFLSSNKLGGHLG 589
           +G + L VV + Q     RL   V D+G      D   L Q         +    G  +G
Sbjct: 552 EGSVRLRVVGVPQSDGGLRLSFIVTDTGIGFAFLDEATLYQRFFQLDGSTTREYGGLGIG 611

Query: 590 LVIAKQLIGLMQGEFGIKSSTGMGNTLWLTLPLDPSRLEQPPA-DLDSPLRDARVLVVDD 648
           L I +QLI L+ G     S    G+   L L + P   +  PA D     ++  VL+VDD
Sbjct: 612 LAICRQLIELLGGRLTHHSEPRKGSRFQLELEVSPVASDSKPAPDRQRAPQECSVLLVDD 671

Query: 649 NDTCRKVLVQQCSAWGMNVSAVPSGKEALALLRTKAHLRDYFDAVLLDQNMPGMTGMQLA 708
           N   + V+       G  V  V +G  ALA L+        FDAVLLD  +P   G  L 
Sbjct: 672 NSVGQLVVRGMLLKLGYRVKTVDTGPNALAALQA-----GDFDAVLLD--IP-EGGFSLC 723

Query: 709 AKIKEDPSLNHDILVVMLTGISNAPSKVIARNAGVKRILAKPVAGYTLKTTLAEEL--AQ 766
            +I+  P    ++ V+ L+   N   +      GV   L KPV    L+  L   L    
Sbjct: 724 CQIRALPGCG-ELPVIALSTSLNVSERERCHGIGVSEHLVKPVRFEALQAVLERRLLCPA 782

Query: 767 RGREQAMPASLP 778
            G   A  A +P
Sbjct: 783 EGESAAYSAGMP 794



 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 6/127 (4%)

Query: 781 PQALDLPGDFRVLVAEDNSISTKVIRSMLGKLNLKPDTACNGEEALQAMKAQHYDLVLMD 840
           P     P +  VL+ +DNS+   V+R ML KL  +  T   G  AL A++A  +D VL+D
Sbjct: 655 PDRQRAPQECSVLLVDDNSVGQLVVRGMLLKLGYRVKTVDTGPNALAALQAGDFDAVLLD 714

Query: 841 CEMPILDGFSATQQLRAWEAENQRQRTPVVALTAHILAEHKERARLAGMDGHMAKPVELS 900
                  GFS   Q+RA     +    PV+AL+  +    +ER    G+  H+ KPV   
Sbjct: 715 IPE---GGFSLCCQIRALPGCGE---LPVIALSTSLNVSERERCHGIGVSEHLVKPVRFE 768

Query: 901 QLRELIQ 907
            L+ +++
Sbjct: 769 ALQAVLE 775