Pairwise Alignments

Query, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  246 bits (628), Expect = 7e-69
 Identities = 168/538 (31%), Positives = 291/538 (54%), Gaps = 24/538 (4%)

Query: 380  ERFSASRALAASDAEINAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTI 439
            +R    +A   ++    AK+EFLA +SHEIRTP+NGV+G T+L+L T LS  Q  Y+  +
Sbjct: 674  QREELKKAKILAEQASKAKSEFLANMSHEIRTPLNGVIGFTDLVLKTDLSETQAQYLSIV 733

Query: 440  HSAGNELLTLINEILDISKLESRQIELDDVQFDLNALIEDCLNIFRAKAEQQNIELISFT 499
            + +GN LL +IN+ILD SK+E+ ++ELD  + DL  L E   +I   +  ++ +E++   
Sbjct: 734  NQSGNALLNIINDILDFSKIEAGKLELDIDRCDLYELTEQTSDIITYEVHKKGLEMLLNI 793

Query: 500  QPQVPRVISGDPTRLRQALSSLLENALKNTDQGEILLVVALDQRGEVPR---LRIAVQDS 556
             P +PR I  D  R++Q + +LL NA K T++GEI L +    + E  R   +R +V+D+
Sbjct: 794  HPDIPRFIWVDSVRVKQIMVNLLGNASKFTEEGEIELQLYPIDKDEASREMVIRFSVRDT 853

Query: 557  GEPLPAADREALLQAELHSHHFLSSNKLGG-HLGLVIAKQLIGLMQGEFGIKSSTGMGNT 615
            G  + A  +  + +A        ++ K GG  LGL I+ +L+ LM     + S+ G G+T
Sbjct: 854  GIGIKAEKQTKIFEA-FSQEDVSTTKKYGGTGLGLTISNRLLQLMHSGLQLHSTVGKGST 912

Query: 616  LWLTLPLDPSRLEQPPADLDSPLRDARVLVVDDNDTCRKVLVQQCSAWGMNVSAVPSGKE 675
             +  L +     E+    L+  L    VL+VDDND  R ++ +  +  G++ S   +G E
Sbjct: 913  FYFDLNVKYEYGER--ITLEEDLSVENVLIVDDNDNNRMIIERMMALRGISTSQAKNGFE 970

Query: 676  ALALLRTKAHLRDYFDAVLLDQNMPGMTGMQLAAKIKEDPSLNHDILVVMLTGISNAPSK 735
            A+     K    + FD VL+D +MP M G++   KI+E   ++   ++ + +   +    
Sbjct: 971  AI----QKFVEGEKFDVVLMDYHMPYMNGIETIRKIRE--IVDRQPIIFLHSSSDDDKIL 1024

Query: 736  VIARNAGVKRILAKPVAGYTLKTTLAEELAQRGREQAMPASLPGIPQALDLPGDFRVLVA 795
               +  GV++ L KP+    +   L     ++   +A   ++  +P+ L  P D +VL+ 
Sbjct: 1025 KACKELGVRKKLVKPIKLQEMYDALLSINKKQDYRKATDQNI-DLPKNL-FPNDGKVLIV 1082

Query: 796  EDNSISTKVIRSMLGKLNLKPDT----ACNGEEALQAMKAQHYDLVLMDCEMPILDGFSA 851
            EDN+I+  + ++++   NL P T    A NG+EAL+ MK +   ++ MD +MP ++G+ A
Sbjct: 1083 EDNTINMLLAKTVIH--NLSPATAILEAANGKEALEVMKDELPSVIFMDVQMPEMNGYEA 1140

Query: 852  TQQLRAWEAENQRQRTPVVALTAHILAEHKERARLAGMDGHMAKPVELSQLRELIQYW 909
            TQ +R    +  +    ++ALTA  +   +E+   AGM+  +AKP     + +L++ W
Sbjct: 1141 TQAIR---KKYNKHNILIIALTAGNIKGEREKCMQAGMNDFIAKPFVEEDVIKLMEKW 1195