Pairwise Alignments

Query, 374 a.a., murein transpeptidase factor from Pseudomonas putida KT2440

Subject, 384 a.a., Rod shape-determining protein RodA from Variovorax sp. SCN45

 Score =  313 bits (801), Expect = 7e-90
 Identities = 182/382 (47%), Positives = 237/382 (62%), Gaps = 18/382 (4%)

Query: 1   MLSSEDVMRRRASFLQRIHIDGPLLIILLTLAAGSLFVLYSASGKNWDLLLKQATSFGIG 60
           + +   + RR A   Q    DG L   +L LA   L  +YS+   +    +    +  + 
Sbjct: 4   VFNQPSLARRIAPIFQGF--DGFLAFAVLLLAFAGLLTMYSSGYDHGTRFVDHGRNMLLA 61

Query: 61  LVSMFVIAQLEP-RFMARWVPLAYLAGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSE 119
              MFV+AQ+ P + M   VPL Y  GV LLV V + G    GA RWIN+  VI  QPSE
Sbjct: 62  GFIMFVVAQVPPQKLMLAAVPL-YAMGVALLVAVALFGITKKGAQRWINLGMVI--QPSE 118

Query: 120 FMKIIMPATIAWYLSKRTLPPHLKHVAISLVLIGVPFMLIVRQPDLGTALLILASGAFVL 179
            +KI MP  +AW+  +R          ++ VL+ VP  LI++QPDLGT+LL+LA+G  V+
Sbjct: 119 ILKIAMPLMLAWWFQRREGQLRPLDFVVATVLLAVPVGLIMKQPDLGTSLLVLAAGLAVI 178

Query: 180 FMGGLRWRWILS-VLAAAVPVAVAMWFF-----------VMHDYQKQRVLTFLDPESDPL 227
           F  GL W+ I+  V+  AV + + + F            V+HDYQKQRV T LDP  DPL
Sbjct: 179 FFAGLPWKLIVPPVVIGAVAITLIVSFESRLCADGVDWRVLHDYQKQRVCTLLDPSKDPL 238

Query: 228 GTGWNIIQSKAAIGSGGVFGKGWLLGTQSHLDFLPESHTDFIIAVLGEEFGLVGICLLLI 287
           G G++IIQ   AIGSGGV GKG++ GTQ+HL+F+PE  TDFI A   EEFGL+G  +L+ 
Sbjct: 239 GKGFHIIQGMIAIGSGGVGGKGFMQGTQTHLEFIPERTTDFIFAAYSEEFGLMGNLMLIS 298

Query: 288 VYLLLIGRGLVITAQAQTLFGKLLAGSLTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYG 347
            ++LLI RGL I   A TLF +LLAG++TM FF Y FVN+GMVSG+LPVVGVPLPFISYG
Sbjct: 299 AFILLIFRGLAIATNATTLFSRLLAGAVTMIFFTYAFVNMGMVSGILPVVGVPLPFISYG 358

Query: 348 GTSLVTLLSAFGVLMSIHTHRK 369
           GT++VTL    G+LMSI   RK
Sbjct: 359 GTAMVTLGLGLGILMSIARARK 380