Pairwise Alignments

Query, 374 a.a., murein transpeptidase factor from Pseudomonas putida KT2440

Subject, 434 a.a., rod shape-determining protein RodA from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  174 bits (442), Expect = 3e-48
 Identities = 112/388 (28%), Positives = 182/388 (46%), Gaps = 61/388 (15%)

Query: 32  AAGSLFVLYSASGKNWDLLLKQATSFGIGLVSMFVIAQLEPRFMARWVPLAYLAGVLLLV 91
           AA S+F     SGK       Q    G  ++ + VI   + R       + Y   +L+L+
Sbjct: 49  AAKSIFDFSINSGK-------QLVWIGTAVLLITVIMVADYRLFDNLSLILYGIFLLILL 101

Query: 92  VVDVMGHNAMGATRWINIPGVIRFQPSEFMKIIMPATIAWYLSKRTLP---PHLKHVAIS 148
           +   +G    G   W  I G  R QP EF K      +A ++ K +     P  +  AI 
Sbjct: 102 LTPFIGKEINGQRAWFEI-GPFRLQPGEFAKFATALALAKFIEKPSFDLSRPKFQFQAIL 160

Query: 149 LVLIGVPFMLIVRQPDLGTALLILASGAFV------------------------------ 178
           ++++  P  LI+ QPD GTA++ +A    +                              
Sbjct: 161 IIML--PVSLIMLQPDTGTAMVYMAFFIMLYREGMPQKYYVFALVFIAISLLSLAVDNNL 218

Query: 179 -------------LFMGGLRWRWILSVLAAAVPVAVAMWFF-----VMHDYQKQRVLTFL 220
                        + MG   W+ I+++    + +    +        +  +Q+ R++   
Sbjct: 219 YIALPVAGLTLVLILMGKKNWQRIVTLCMIGIAIIAYSYSLDLVVSKLPQHQQNRIMVLF 278

Query: 221 DPESDPLGTGWNIIQSKAAIGSGGVFGKGWLLGTQSHLDFLPESHTDFIIAVLGEEFGLV 280
           +P+ DPLG GWN+ QSK AIGSGG +GKG+L GTQ+  DF+PE HTDFI   LGEEFG +
Sbjct: 279 NPDIDPLGVGWNVTQSKIAIGSGGFWGKGYLEGTQTKFDFVPEQHTDFIFCTLGEEFGWI 338

Query: 281 GICLLLIVYLLLIGRGLVITAQAQTLFGKLLAGSLTMTFFVYVFVNIGMVSGLLPVVGVP 340
           G  +++++++ L+ R + +  + +T F ++    +      +  +NI M  GL PVVG+P
Sbjct: 339 GSLIVVLLFVALLIRLVFLAERQKTRFSRVYGYCVISILLFHFMINISMTIGLFPVVGIP 398

Query: 341 LPFISYGGTSLVTLLSAFGVLMSIHTHR 368
           LPF SYGG+SL +      + + + +HR
Sbjct: 399 LPFFSYGGSSLWSFTILLFIFIKLDSHR 426