Pairwise Alignments

Query, 333 a.a., RlpA-like lipoprotein from Pseudomonas putida KT2440

Subject, 387 a.a., endolytic peptidoglycan transglycosylase RlpA from Dickeya dianthicola ME23

 Score =  111 bits (278), Expect = 3e-29
 Identities = 88/295 (29%), Positives = 135/295 (45%), Gaps = 40/295 (13%)

Query: 17  AVGVALASCS-SNRPAPKSSGNVVRSQPGLDINRAHKDGAPWWDVDVNKIPDATPTVHTG 75
           A+ +ALA C+ + +P   S      + P  +I  A     P+   ++             
Sbjct: 10  AISLALAGCAVTEQPQSSSPQATAYNGPVEEIGGAEPRYEPYKPANMQD----------- 58

Query: 76  NYKANPYTVLGKTYYPMQDSRNYRAEGTASWYGTKFHGQNTANGELYDLYGMSAAHKTLP 135
                 Y + GKTY+ +++  N+   G A+W+  +  G  TA GE +D+  MSAAH TLP
Sbjct: 59  ------YGMNGKTYHIVKNPENFSESGFATWHDRESVGNRTATGEEFDVNAMSAAHPTLP 112

Query: 136 LPAYVRVTNLANGRSVILRVNDRGPFYSDRIIDLSYAAAKKLGYAEIGTAHVRVEGIDPQ 195
           +P+YVRVTNL+NGR +++R+NDRGP+   RIIDL+  AA +L  +      V    + P 
Sbjct: 113 IPSYVRVTNLSNGRRLVVRINDRGPYTPGRIIDLTKGAADRLNLSNNTKVKVDFISVAPD 172

Query: 196 QWWAQRGQTPPMVLKEPQVAQTQAIPASTG---RVEQWTPPPQQHAAPVVPVQV------ 246
              +  G     V K+     ++    S+G    V +  P     A P+    +      
Sbjct: 173 GSLSGPGTIGTRVAKQSFALPSRPTLGSSGLGTPVMESAPATAAAARPISNATLTPAADN 232

Query: 247 GGNNVPGG----------NGGSFLQVGAFANPDAAELLRAKLSTMVNAPVFISSI 291
           GG+N+  G          NGG FL  GA   P  + +L     T   APV  ++I
Sbjct: 233 GGSNIVSGNPSVSNTGVSNGGGFL--GA-PKPLPSGVLEGSEPTSAAAPVRATAI 284



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 12/113 (10%)

Query: 185 AHVRVEGIDPQQWWAQRGQTPPMVLKEPQVAQTQAIPASTGR--VEQWTPPPQQHAAPVV 242
           A VR   I P    A     P   L +P      A+PA  G   V+      QQ A   +
Sbjct: 277 APVRATAITPAVAAAPVAVQPSRTLSQP------AVPAGAGNIVVQVGALSDQQRAQTWL 330

Query: 243 PVQVGGNNVPG----GNGGSFLQVGAFANPDAAELLRAKLSTMVNAPVFISSI 291
                   VPG     NG   +Q+G F +   A  L+ +LS+    P FI+++
Sbjct: 331 KSLNERFRVPGKVTLNNGLYRIQLGPFQSRQHAADLQQRLSSEAQQPSFITTV 383