Pairwise Alignments

Query, 386 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

Subject, 499 a.a., penicillin-binding protein from Agrobacterium fabrum C58

 Score =  155 bits (392), Expect = 2e-42
 Identities = 97/256 (37%), Positives = 137/256 (53%), Gaps = 6/256 (2%)

Query: 17  LITPAAFAAE---QMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTKLMTAYI 73
           L   AAF A    Q   A P+ A    +++DA SG VL   + D    PASLTK+MT Y+
Sbjct: 31  LTLAAAFIAATSVQTAKADPKYAG---IVIDAKSGKVLYGEDPDGLRYPASLTKMMTLYL 87

Query: 74  ATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDASVALA 133
               +  G+I     VTVS NA +   S++ ++ G  VTV   +  ++ +S ND + AL 
Sbjct: 88  TFEALNSGRISLDSRVTVSANAAKEPPSKLGVRAGGSVTVEQAILALVTRSANDMATALG 147

Query: 134 EHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPHPEHYSSAHDMATLARAIINVDPAH 193
           EH+ GSED FA MM   A  LGMT + + N  GLP+    ++A D A L  A+    P +
Sbjct: 148 EHLGGSEDRFARMMTAKARALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQHFPQY 207

Query: 194 YAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQRLIAVVF 253
           Y  +S + F +      N N L+   K VDG+KTG+T  AG  +  SA  DG+ ++AVV 
Sbjct: 208 YGYFSTRTFNFGKQVIGNHNRLVGTVKGVDGIKTGYTRAAGSNLATSAQLDGRSIVAVVL 267

Query: 254 GTNSEQSRAAETQKLL 269
           G  S  +R A  +KL+
Sbjct: 268 GGRSSAARDATMRKLV 283