Pairwise Alignments

Query, 345 a.a., DNA polymerase III, delta subunit from Pseudomonas putida KT2440

Subject, 343 a.a., DNA polymerase III subunit delta from Dickeya dianthicola ME23

 Score =  183 bits (465), Expect = 5e-51
 Identities = 120/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 1   MKLAPAQLNKHLQGALAPVYVVSGDDPLLCQEAADAIRNAARQQGFDERQVFSADANFDW 60
           +++ P QL   L   L   Y++ G++PLL QE+ D IR  ARQQ F E   F+ D N DW
Sbjct: 2   IRIYPEQLTAQLHEGLRGCYLLFGNEPLLLQESQDQIRTIARQQDFLEHFSFTLDNNTDW 61

Query: 61  GTLLQAGASLSLFAQRRLLELRLPSGKPGDKGAAALMEYCANPAEDTLLLISLPKLDSSA 120
             +     +LSLFA R+ L L LP   PG      L++       D LL++   KL  + 
Sbjct: 62  DAIFSTCQALSLFASRQTLLLMLPDAGPGAPAGEQLVKLTTLLHPDILLMVRGNKLTKAQ 121

Query: 121 QKTKWGKALIEGAHCQFIQIWPVDVHQLPQWINQRLQQAGLSAQRDAVDLIAARVEGNLL 180
           + + W KAL +     ++     +  QLP+W+ QR +   L     A  LI    EGNLL
Sbjct: 122 ENSAWFKALSQQG--VYVPCMTPEQEQLPRWVAQRAKNMKLELDDAASQLICYCYEGNLL 179

Query: 181 AAAQEIEKLKLLAEGSQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGE 240
           A  Q +E+L LL    ++T+  V+ AV D+A F  F  +DA+L G++  A  +L+ LR E
Sbjct: 180 ALVQALERLSLLYPDGKLTLPRVEQAVNDAAHFTPFHWLDALLGGKSKRAWHILQQLRLE 239

Query: 241 GVEPPVILWALARELRQLAGLAQQFSQGVPLDKAFSQARPPIWDKRRPLVSKALQRLSAQ 300
             EP ++L  + REL  L  L +  +   PL     Q +  +W  RRPL+++ALQRLS  
Sbjct: 240 ECEPVILLRTVQRELLLLLQLKRHMAT-TPLRTLLDQHK--VWQNRRPLLTQALQRLSLT 296

Query: 301 RWAQLLQDAQRIDAQIKGQAEGSP-WIGLARLSLLMAGQRL 340
           +  Q +    R++  +K Q  G P W  L  LS+++ G+ L
Sbjct: 297 QLQQAITLLSRLEITLK-QNYGQPVWAELETLSMILCGKAL 336