Pairwise Alignments

Query, 550 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score = 79.7 bits (195), Expect = 3e-19
 Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 42/318 (13%)

Query: 183 MAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCD-----AFLTLAQTE 237
           M +TE Q G+D+ A  +RA        G  Y + G+K F +    D       L LA+  
Sbjct: 162 MNLTEPQAGSDLAALRSRAVH-----EGDHYHVSGNKIFITWGEHDMAENIVHLVLARLP 216

Query: 238 ------KGLSCFLLPRHRPDDN-----RNQFYIQRLKNKLGNSSNASSEVEFR---GALA 283
                 KG+S FL P++  +D+     RN      +++K+G   + ++ + F    GA+ 
Sbjct: 217 DAPPGVKGISLFLCPKYLVNDDGTLGERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIG 276

Query: 284 WMIGEEGRGVPTIIEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQ---- 339
           +++GE  +G+  +  M+   R +  +    +  +A  +A  +   R  G  +++      
Sbjct: 277 YLVGEPHQGLACMFTMMNHARLNVGLEGVGISERAYQRARAYALERVQGKPLISGSTAIA 336

Query: 340 --PLMQNVLADLALESEAALALSL----RMGQALEQLDDPQQAHFARLV---TAVGKYWI 390
             P ++ +L D+   +EA  AL+     +M +A    D  ++A    LV     V K W 
Sbjct: 337 GHPDVRRMLMDMKARTEAMRALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWC 396

Query: 391 CKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNVQCLDVL-RALSKEPG 449
              A  + ++  +  GG GYVE++   +  R+A + + +EG+  +Q  D++ R L++E G
Sbjct: 397 TDSAQGITSDGVQVHGGMGYVEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGG 456

Query: 450 -VLDALFVELGDGHGDPR 466
             L AL   LG   GD R
Sbjct: 457 RTLKAL---LGRIDGDAR 471