Pairwise Alignments

Query, 550 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 581 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 121/503 (24%), Positives = 195/503 (38%), Gaps = 68/503 (13%)

Query: 89  PAYHELMRTAVEHGLPSLPWAEPRAGAHVARASMTYLHSQ-AEAGTGCPLT--MTFAAVP 145
           P + E  +  V+ G P+L  A    G  +       L+   A A  G  +   +   A  
Sbjct: 76  PGFREAYQAFVDGGWPALSAAPEDGGQGLPAVLEAVLYEWLAAANHGFTMAPGLLHGAYA 135

Query: 146 ALRLQ--PELAEYWLPKILACEYDPRNVGDRHKAGVTLGMAMTEKQGGTDVRANTTRAYP 203
            L+     EL + +L KI   E+                M +TE   G+D+    TRA P
Sbjct: 136 CLKHHGSDELKQRYLSKIATGEW-------------LATMCLTEAHAGSDLGQVRTRAVP 182

Query: 204 VGAPGPGQAYELVGHKWFCSAPMCD-----AFLTLAQTE------KGLSCFLLPRHRPDD 252
             A G   +  + G K F S    D       L L +        KGLS  L+P+  PD 
Sbjct: 183 Q-ADG---SVRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPDGPKGLSLALVPKLLPDG 238

Query: 253 NRNQFYIQRLKNKLGNSSNASSEVEFRGALAWMIGEEGRGVPTIIEMVAMTRFDCMVGSS 312
            RN  + +R++ K+G   + +  + F  A  W++GE GRG+  +  M+   R    +   
Sbjct: 239 ARNAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGLAAMFVMMNSARLHVALQGI 298

Query: 313 ALMRQALTQAAHHCAHRKV-----------GGR---VLNEQPLMQNVLADLALESEAALA 358
            L+  A  +A  + A R+            GG    ++ E P ++ +L       + A A
Sbjct: 299 GLLDAAWQKADAYAAERRQMRAPGPVPASRGGESADLIAEHPAVRRILDTQRAWIDGARA 358

Query: 359 LSLRMGQALEQLDDPQQA-------HFARLVTAVGKYWICKRAPAMINEAAECLGGAGYV 411
           L+ R    L+       A        +   VT V K    ++A    +E  +  GG GYV
Sbjct: 359 LAYRSALMLDVAAHDADAKARERAQRWCSFVTPVLKAACTQQAFHGASECLQVFGGHGYV 418

Query: 412 EDSILPRLYREAPVNSTWEGSGNVQCLDVL--RALSKEPGVLDALFVELGDGHGDPRLAA 469
            +  + ++ R++ V   +EG+  +Q +D+L  + L      + A+ +EL D         
Sbjct: 419 REWGIEQIVRDSRVTMIYEGTNEIQAIDLLVRKVLPDGGAGMSAVLLELRD--------- 469

Query: 470 HIGNLKGAFADTGDMQYRARQLTEDIALALQAKLLLEAGNAD--VSDAFIGSRLAGGGRV 527
            +   + A AD      + R L   +A+A  A   L    AD  +  A +        R+
Sbjct: 470 TLDASREADADVQRRLAQLRYLGTTVAMAAHANPALPYEVADDYLRVAMLTMLAWAWARI 529

Query: 528 YGALPRGVNVMALVTRATPAWPL 550
             A PR     A V  A   W L
Sbjct: 530 EAAAPRDA-ARARVAAAFRRWVL 551