Pairwise Alignments

Query, 550 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 7e-21
 Identities = 81/278 (29%), Positives = 125/278 (44%), Gaps = 26/278 (9%)

Query: 178 GVTLG-MAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFC-SAPMCDAFLTLAQ 235
           G  LG   +TE Q G+D  +  T A        G AY + G K F  S       + +A 
Sbjct: 115 GKMLGAFCLTEPQAGSDASSLRTTARK-----DGDAYVIDGVKQFITSGKNGQVAIVIAV 169

Query: 236 TEKG-----LSCFLLPRHRPDDNRNQFYIQRLKNKLGNSSNASSEVEFRGA---LAWMIG 287
           T+KG     +S FL+P   P  N     + RL++KLG  S+ ++++ F G    +  +IG
Sbjct: 170 TDKGAGKRGMSAFLVPTDAPGYN-----VARLEDKLGQHSSDTAQINFDGCRIPVENLIG 224

Query: 288 EEGRGVPTIIEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVGGRVLNEQPLMQNVLA 347
            EG G    +  +   R      S  + R A   A  +   R+  G  + +Q  +   LA
Sbjct: 225 AEGEGYKIALGALEGGRIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLA 284

Query: 348 DLALESEAALALSLRMGQALEQLDDPQQAHFARLVTAVGKYWICKRAPAMINEAAECLGG 407
           + A + EAA  L +    AL     P          A+ K +  + A  + + A + LGG
Sbjct: 285 ECATQLEAARQL-IWHAAALRDAGRPCLKE-----AAMAKLFASEMAERVCSAAIQTLGG 338

Query: 408 AGYVEDSILPRLYREAPVNSTWEGSGNVQCLDVLRALS 445
            GYV D  L R+YR+  V   +EG+ ++Q L + RAL+
Sbjct: 339 YGYVNDFPLERIYRDVRVCQIYEGTSDIQKLLIQRALA 376