Pairwise Alignments

Query, 550 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 600 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 48/344 (13%)

Query: 177 AGVTLG-MAMTEKQGGTDVRANTTRAYPVGAPGPGQAYELVGHKWFCSAPMCDA-----F 230
           +GV  G M +TE   GTD+    T+A P G      ++ + G K F SA   D       
Sbjct: 156 SGVWTGTMNLTEPHSGTDLGLIKTKAVPNG----DGSFAISGTKIFISAGEHDLAENIIH 211

Query: 231 LTLAQT------EKGLSCFLLPRHRPDDN-----RNQFYIQRLKNKLGNSSNASSEVEFR 279
           L LA+T       KG+S F++P+   +++     RN      L++K+G   NA+  + + 
Sbjct: 212 LVLAKTPGAPDSSKGISLFVVPKFIVNEDGSLGDRNAVSCGSLEHKMGIHGNATCVMNYD 271

Query: 280 GALAWMIGEEGRGVPTIIEMVAMTRFDCMVGSSALMRQALTQAAHHCAHRKVG------- 332
           GA  W++GEE +G+  +  M+   R    +        A   A H+   R+ G       
Sbjct: 272 GAKGWLVGEENKGLAAMFIMMNAARLGVGLQGLGQGEIAFQNAVHYAKDRRQGRALTGPK 331

Query: 333 -----GRVLNEQPLMQNVLADLALESEAALALSLRMGQALEQL------DDPQQA--HFA 379
                   L   P ++ +L +    +E   AL L  G     L      ++ +QA     
Sbjct: 332 EPEEKADTLFVHPDVRRMLMEGKALTEGLRALIL-WGALQHDLSHSAATEEERQAADDLL 390

Query: 380 RLVTAVGKYWICKRAPAMINEAAECLGGAGYVEDSILPRLYREAPVNSTWEGSGNVQCLD 439
           +L+T V K +   +   +   + +  GG GY+ ++ + +  R+A +   +EG+  VQ +D
Sbjct: 391 QLLTPVIKGYGTDKGFDVAVSSQQVFGGHGYIWENGVEQYVRDARIAQIYEGTNGVQAMD 450

Query: 440 VL-RALSKEPG-----VLDALFVELGDGHGDPRLAAHIGNLKGA 477
           ++ R L    G      L  L  E+ +  G+ +LA+    L+ A
Sbjct: 451 LVGRKLPMNGGRALQAFLKILATEIAEAKGNEKLASFADALEKA 494