Pairwise Alignments

Query, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

Subject, 1303 a.a., ATP-dependent helicase HrpA from Pseudomonas simiae WCS417

 Score =  249 bits (635), Expect = 1e-69
 Identities = 177/472 (37%), Positives = 254/472 (53%), Gaps = 30/472 (6%)

Query: 3   SLPIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRLAA 62
           SLPI A    +++AL     +++    G+GKTT++P   L         I   +PRR+AA
Sbjct: 71  SLPIAAKRDEIKEALNKHQVLIIAGETGSGKTTQLPKICLEIGRGQFGLIGHTQPRRIAA 130

Query: 63  RAAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGLLI 122
           R+ A R+A EL   +G  VGY++R + +    T I+++T+GIL    Q D  LE    +I
Sbjct: 131 RSVASRVAEELATPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQNDRYLERYDTII 190

Query: 123 FDEFHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDAPVVSSEGR 182
            DE HERSL+ D  L      + LL   P LK+++ SAT++ ER S+  DDAP+V   GR
Sbjct: 191 VDEAHERSLNIDFLLGYL---KTLLPRRPDLKVIITSATIDLERFSKHFDDAPIVEVSGR 247

Query: 183 MHPVDIRWGRPF-----QPGEFIEPRV-VDCVLHALADQA-----------GSVLVFLPG 225
             PVD  W RP      + G  +E  + VD  + A  D+            G VLVFLPG
Sbjct: 248 TFPVDT-WYRPLTLEQDEEGNRVEDDLTVDQAILATLDEIAAYERSERRSPGDVLVFLPG 306

Query: 226 QAEIRRVHQSLQEVLGARPEILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSL 285
           + EIR   + L++      EIL  PL+  L   A++  I     G R+VVLATN+AETSL
Sbjct: 307 EREIRDAAEVLRKAQLKHTEIL--PLYARLS-PAEQQRIFQSHPG-RRVVLATNVAETSL 362

Query: 286 TIDGVRVVIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEA 345
           T+ G+R VID+G AR+ R+   + + RL  + IS+ASA QR GR GR+EPG+C RL+SE 
Sbjct: 363 TVPGIRYVIDSGTARISRYSYRAKVQRLPIEAISQASANQRKGRCGRVEPGICVRLYSEE 422

Query: 346 QHDQLAAHGSAEILQADLAGLALQL--ARWGVTPEQLRWLDQPPAAAYAQAQDLLARLSA 403
                      EIL+ +LA + LQ+   R G   +   +++ P   A +   +LL  LSA
Sbjct: 423 DFIGRPEFTDPEILRTNLAAVILQMLHLRLGEITD-FPFIEPPDGKAISDGFNLLQELSA 481

Query: 404 FRPGSRDTLSEHGQAMAELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERD 455
               S+  L+  G+ +A LP  PR+  +LL    LG  Q    VA+ +  +D
Sbjct: 482 VDRNSQ--LTPLGRQLARLPVDPRMGRMLLEAAKLGSLQEVLIVASAMSIQD 531