Pairwise Alignments

Query, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

Subject, 1261 a.a., ATP-dependent helicase HrpA from Variovorax sp. SCN45

 Score =  221 bits (563), Expect = 2e-61
 Identities = 170/523 (32%), Positives = 261/523 (49%), Gaps = 51/523 (9%)

Query: 16  ALENRDEVVLEAPPGAGKTTRVP---LAL----LHEPWLAGQSILMLEPRRLAARAAAER 68
           A+     V++    G+GKTT++P   LAL    L+     G+ I   +PRR+AA + A+R
Sbjct: 3   AISAHQVVIVCGETGSGKTTQLPKIALALGRGKLNAEPGKGRLIGHTQPRRIAASSVAKR 62

Query: 69  LASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGLLIFDEFHE 128
           +A EL   +G+ VG+++R   ++     ++++T+GIL    Q DP L+    LI DE HE
Sbjct: 63  IAEELKTPLGDVVGFKVRFQDRLSRDASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHE 122

Query: 129 RSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDA----PVVSSEGRMH 184
           RSL+ D  L      RE+L   P LK+++ SAT++ +R ++    A    P +   GR  
Sbjct: 123 RSLNIDFLLGYL---REILPRRPDLKVIVTSATIDADRFAQHFASAKGPAPTIMVSGRTF 179

Query: 185 PVDIRWGRPFQPGEF--IEPRVVDCVLHALAD--QAGSVLVFLPGQAEIRRVHQSLQEVL 240
           PV+ R+ RPF+      +   + D V     D   AG +L+FLPG+ EIR     L+  +
Sbjct: 180 PVEQRY-RPFEESREHDLNDAIADAVDELWRDPHNAGDILIFLPGEREIREAADHLRRHV 238

Query: 241 GARP-----EILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSLTIDGVRVVID 295
             +P     E+L  PL   L    Q    +  +   R++VLATN+AETSLT+ G+R VID
Sbjct: 239 SHQPLFRSAEVL--PLFARLSGPEQDRIFE--SHNGRRIVLATNVAETSLTVPGIRYVID 294

Query: 296 AGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEAQHDQLAAHGS 355
            G ARV R+   S + +L  + IS+A+A QRAGR GR+  G+C RL+ E   +       
Sbjct: 295 TGTARVKRYSFRSKVEQLLVEPISQAAANQRAGRCGRVANGICIRLYDEKDFEGRPRFTD 354

Query: 356 AEILQADLAGLALQL--ARWGVTPEQLRWLDQPPAAAYAQAQDLLARLSAFRPGSRDTLS 413
            EIL++ LAG+ L++   R G    +  +L+ P   A A    LL  L A      + L+
Sbjct: 355 PEILRSSLAGVILRMKSLRLG-DVARFPFLEAPSPRAIADGYQLLNELGAV--DDANELT 411

Query: 414 EHGQAMAELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERDIQ------RGGGADLHSR 467
             G  ++ LP  PR+  ++L  +  G  +    +A+ L  +D++      +      HS+
Sbjct: 412 HTGAELSRLPLDPRVGRMILEARARGALEEVLIIASALSVQDVRDRPMDAQQQADQAHSK 471

Query: 468 LALVSGESKA----------ARGGQGGVQRARQLARQYRGLLR 500
                 E             ARGG G   +     RQY  LLR
Sbjct: 472 FDDEKSEFSGYLRLWKWIADARGGHGDTHKLSN--RQYEQLLR 512