Pairwise Alignments

Query, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

Subject, 823 a.a., ATP-dependent helicase HrpB from Dickeya dadantii 3937

 Score =  607 bits (1565), Expect = e-178
 Identities = 381/839 (45%), Positives = 501/839 (59%), Gaps = 30/839 (3%)

Query: 5   PIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRLAARA 64
           P+ A L  + QAL    +V+L AP GAGK+T +PL LL     +G+ I+MLEPRRLAA++
Sbjct: 5   PVSAVLDDVIQALHTAPQVLLHAPTGAGKSTWLPLQLLQRSGFSGR-IIMLEPRRLAAKS 63

Query: 65  AAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGLLIFD 124
            A RLA  LGE  G+TVGYR+R +S+V  +TR+EVVTEGILTR LQ DPAL+GV L+I D
Sbjct: 64  VAFRLAEWLGETPGQTVGYRMRSESRVSSQTRLEVVTEGILTRMLQHDPALDGVSLVILD 123

Query: 125 EFHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDAPVVSSEGRMH 184
           EFHERSL ADLALAL L+ ++ LRDD  LK+L+MSATL+  RLS LL  +  VSS+GR  
Sbjct: 124 EFHERSLQADLALALLLDVQQGLRDD--LKLLIMSATLDNSRLSSLLPQSLSVSSQGRSW 181

Query: 185 PVDIRWGRPFQPGEFIEPRVVDCVLHALADQAGSVLVFLPGQAEIRRVHQSLQEVLGARP 244
           PV+ R  +     E +E      +   L ++ GS+LVFLPG AEI+R+   L+    A  
Sbjct: 182 PVE-RHYQTVGSQERLEEAAARLIYRLLQEETGSLLVFLPGVAEIKRLQTLLENA--APT 238

Query: 245 EILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSLTIDGVRVVIDAGLARVPRF 304
            + +CPL+G L L  Q+ AI P A G RKVVLATNIAETSLTI+G+RVV+D GL RV  F
Sbjct: 239 AVDICPLYGALTLAEQQKAILPAAAGRRKVVLATNIAETSLTIEGIRVVVDCGLERVALF 298

Query: 305 DPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEAQHDQLAAHGSAEILQADLA 364
           D  +G+TRL TQRIS+AS  QRAGRAGRLEPGVC+ L++  Q ++ AA    EIL +DL+
Sbjct: 299 DVKTGLTRLTTQRISQASMVQRAGRAGRLEPGVCWHLFAREQAERAAAQSEPEILHSDLS 358

Query: 365 GLALQLARWGVTP-EQLRWLDQPPAAAYAQAQDLLARLSAFRPGSRDTLSEHGQAMAELP 423
           GL L L +WG +   QL WLD PP  A   A  LL +L      ++  L+  G+ MA L 
Sbjct: 359 GLRLDLLQWGCSDVAQLCWLDTPPQPALLAADRLLTQLGTC--DAQQRLTADGRKMAALG 416

Query: 424 AHPRIAHLL-LRGQDLGLAQMACDVAALLGERDIQRGGGADLHSRLALVSGESKAARGGQ 482
           + PR+A +L   GQD      A  +AA++ E    R G  +L   L          R   
Sbjct: 417 SDPRLAAMLHAAGQDPDALATAALLAAIIEEP--PRAGSPNLSDAL---------HRPAN 465

Query: 483 GGVQRARQLARQYRGLLRGKV--GAPVADPDHPRWLGALLALAYPDRVAQQRRAGGAEYR 540
              +RA+QLAR+  G   GKV  G   A   +      LL+  + DR+A++R   G  Y+
Sbjct: 466 HWQRRAQQLARR-AGKTSGKVDAGKVNAGKVNESLAAWLLSAGFADRIARRRGQDG-RYQ 523

Query: 541 LANGRAALFGEVDALMKCPWLVIADLGSRQGQREERIYLAAEFDPALLEGVLAEQVERVD 600
           LANG  A     DAL    WL+   L       + RI LA   D   L     E V   +
Sbjct: 524 LANGSGASLPPEDALAASEWLLTPVLMQSPNSADARILLALPVDIDQLARQRPELVTEQN 583

Query: 601 ILDWDEREQVLRAERQVKVGELVLSREPLPGLDDEARTRALLGLVRRKGLNLLTWTPELR 660
           ++ WDE +  LRA  + ++G L LS  PL    DEA  +A+L  +R +GL++L W     
Sbjct: 584 LMHWDEEKGTLRASLRTQIGSLTLSSRPLAKPSDEALQQAMLNWLREQGLSVLNWDEPAL 643

Query: 661 QWQARVALLRQLDLQKDGHSEWPDLGDEALLASLEDWLQPYLSKVSRLSHFAALDLPSML 720
           Q + R+   RQ   +      WP + D+ALLASLE WL P L+ V        ++L   L
Sbjct: 644 QLRQRLQCARQWLPE----VAWPAVDDDALLASLELWLLPSLNGVRDRRTLNQINLSDAL 699

Query: 721 RNLLPWPLPQRLEEQAPAHLAVPSGSNIRLDY-SETPPILAVRLQELFGLADTPRIANGR 779
             LL W   QRL+   P+H  VP GS + + Y ++ PP+LAVRLQE+FG   +P +A GR
Sbjct: 700 WRLLDWSQRQRLDSALPSHYTVPGGSRLPIRYDADQPPVLAVRLQEMFGEHSSPLLAEGR 759

Query: 780 QQVKLHLLSPARRPVQVTQDLASFWRTTYAEVKKDLKGRYPKHYWPDDPLVAEATARAK 838
             + L LLSPA RP+Q+T+DLA+FW   Y EV+K++KGRYPKH WPDDP     T R +
Sbjct: 760 VALVLELLSPAMRPLQITRDLAAFWNGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTR 818