Pairwise Alignments

Query, 203 a.a., Exonuclease from Pseudomonas putida KT2440

Subject, 233 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score = 67.0 bits (162), Expect = 3e-16
 Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 3/195 (1%)

Query: 3   RIAVIDFETTGISPGTGCRATEVAVVMLEGGRIVER-YQSLMNAGVPVPAFVAGLTGITT 61
           R  + D ETTG  P +G R  E+  + L       R + +  N    +P+    + G+++
Sbjct: 2   REIIFDTETTGFDPASGDRLVEIGCIELINRVPTGRTFHAYYNPQRDMPSAAEAVHGLSS 61

Query: 62  AMLRSAPPVEKVMNEVAEFVGGTPLLAHNAAFDQKFWDYELGRIGRS--RSQPFACSLLL 119
             L   P   + + E+ +F+  +PL+AHNA FD  F ++EL    R          ++ +
Sbjct: 62  QFLSDKPLFREGVAELMDFLEDSPLVAHNARFDFGFLNHELKLCARDAVSMDRMIDTVAI 121

Query: 120 SRRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQYLAGVLRQDHGVQQLSH 179
           +R L P A +      TR+         H A+ DAE+ A L   L G  +   G+ Q   
Sbjct: 122 ARTLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAQLYVELTGGRQIGLGLAQEEE 181

Query: 180 ELLCRLQKTPAAKLR 194
           + + R++ T  A +R
Sbjct: 182 KEIVRVELTETAVVR 196