Pairwise Alignments

Query, 203 a.a., Exonuclease from Pseudomonas putida KT2440

Subject, 243 a.a., DNA polymerase III epsilon subunit from Escherichia coli BL21

 Score = 55.8 bits (133), Expect = 6e-13
 Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 15/211 (7%)

Query: 3   RIAVIDFETTGISP----GTGCRATEVAVVMLEGGRIV-ERYQSLMNAGVPVPAFVAGLT 57
           R  V+D ETTG++       G +  E+  V +   R+    +   +     V     G+ 
Sbjct: 7   RQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVH 66

Query: 58  GITTAMLRSAPPVEKVMNEVAEFVGGTPLLAHNAAFDQKFWDYELGRIGRS--RSQPF-- 113
           GI    L   P   +V +E  +++ G  L+ HNAAFD  F DYE   + R   ++  F  
Sbjct: 67  GIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCK 126

Query: 114 -ACSLLLSRRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQYLAG-----V 167
              SL ++R++ P   N       R+       T H A+ DA++ A +   + G      
Sbjct: 127 VTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSMA 186

Query: 168 LRQDHGVQQLSHELLCRLQKTPAAKLREALA 198
              +   QQ   E   +     A+KLR   A
Sbjct: 187 FAMEGETQQQQGEATIQRIVRQASKLRVVFA 217