Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  696 bits (1797), Expect = 0.0
 Identities = 350/444 (78%), Positives = 392/444 (88%), Gaps = 2/444 (0%)

Query: 1   MNFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVL 60
           M FA LGLIEPLLR L+ L Y TPTPVQA+AIPAVLAGRDLMAAAQTGTGKTAGFA+P+L
Sbjct: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60

Query: 61  QRLALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMR 120
           Q L +EG KVA+NS RAL+L PTRELAEQVH +V EYA+NLPLTTYAVYGGVSINPQMM+
Sbjct: 61  QLLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMK 120

Query: 121 LRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKR 180
           LR+GVD+LVATPGRL+DLFRQNA+K NQ+QTLVLDEADRMLDLGF+EEL ++Y  LP+KR
Sbjct: 121 LRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKKR 180

Query: 181 QTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCHLLR 240
           QTLLFSATFSD IR+LAG  LNDPLSIEVSPRN  A +VKQW+VPVDKKRK +LF HL+R
Sbjct: 181 QTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFVHLMR 240

Query: 241 KQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVLVA 300
           K RWKQVLVFAKTRNGVD LV++L   G+NADGIHGD+PQATRQRALD FK+ EVQ+LVA
Sbjct: 241 KGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILVA 300

Query: 301 TDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAIE 360
           TDVAARGLDI+DLPLVVN DLPIVAEDY+HRIGRTGRAGN GEAISLVCADEV +L+AIE
Sbjct: 301 TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAIE 360

Query: 361 VLTRQTLPRHEEPDFIPEHRVPMTDASGQVIKKPKKPKKPKEN--SAKRGLGRWMDSTEA 418
           +LTRQTL RH E DF PEHRVP TDASGQV+KKPKKPKKPK +    KR LG+W+DS E 
Sbjct: 361 MLTRQTLTRHMEQDFEPEHRVPDTDASGQVVKKPKKPKKPKSSGGGGKRNLGKWVDSGEV 420

Query: 419 ASAEPAVKAVRKVPSFNGGPRKRK 442
           A AEP++K VRKVP FN GPRK+K
Sbjct: 421 APAEPSIKPVRKVPVFNTGPRKKK 444