Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

 Score =  330 bits (846), Expect = 6e-95
 Identities = 191/429 (44%), Positives = 267/429 (62%), Gaps = 22/429 (5%)

Query: 2   NFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQ 61
           +F+ L L EPL R + ++ Y T TP+Q +AIP VL+G+D+M AAQTGTGKTA F+LP+LQ
Sbjct: 4   SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63

Query: 62  RLALEGEKV----ASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQ 117
           R+ L+ E      A + +RALVL+PTRELA+QV   ++ YA+   L +  V+GG+ + PQ
Sbjct: 64  RM-LKHENASTSPARHPVRALVLLPTRELADQVAQQIKLYAKYTNLRSTVVFGGIDMKPQ 122

Query: 118 MMRLRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALP 177
            + L++GV++LVATPGRLLD         NQV+ +VLDEADRMLD+GF  +LQ + + LP
Sbjct: 123 TLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLP 182

Query: 178 RKRQTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCH 237
           ++R TLLFSATFS +I+ LA   L +P++IEV+  N TA++V+Q    V    K      
Sbjct: 183 KQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRALKQ 242

Query: 238 LLRKQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQV 297
           ++R++   Q  VF  ++ G  +L   L  +G+    +HGD+ Q  R +AL SFKA EV +
Sbjct: 243 IVRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVDL 302

Query: 298 LVATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVC-ADEVQLL 356
           LV TDVAARGLDI D+P V N D+P  AEDYVHRIGRTGRAG  G A+S     ++ +L+
Sbjct: 303 LVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARLV 362

Query: 357 AAIEVLTRQTLPRHEEPDFIPEHRVPMTDASGQ--------------VIKKPKKPKKPKE 402
           A IE L ++ +    EP    E R       G+              V+ +P++      
Sbjct: 363 ADIEKLIKKKI--ELEPVEFEEDRPRGRINDGRRHWREEGEAGDARDVLDQPRERSSSLS 420

Query: 403 NSAKRGLGR 411
             A+RG GR
Sbjct: 421 GDARRGGGR 429