Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 563 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  316 bits (810), Expect = 1e-90
 Identities = 184/445 (41%), Positives = 258/445 (57%), Gaps = 7/445 (1%)

Query: 3   FAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQR 62
           F  LGL   +L+ L +  YT PTP+QA+AIP VL GRD++  AQTGTGKTA F LP+++ 
Sbjct: 20  FEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIEI 79

Query: 63  LALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMRLR 122
           LA    K  +   R+L+L PTRELA QV  N  +Y +  PL    + GG S++ Q+  L 
Sbjct: 80  LAAGRAK--ARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSDQVALLD 137

Query: 123 RGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKRQT 182
           RGVD+L+ATPGRLLD+F +  +  N V+ LV+DEADRMLD+GF  +++ +   LP+ RQT
Sbjct: 138 RGVDVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQT 197

Query: 183 LLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCHLLRKQ 242
           L FSAT   +IR LA   L +P  ++VS   + A +V Q L  V++  K +   HL+R +
Sbjct: 198 LFFSATMGPEIRRLADAFLMNPKEVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIE 257

Query: 243 RWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVLVATD 302
             K   +F   +  VD L   L   G +   +HGD  Q+ R   L+ FK  E +++V +D
Sbjct: 258 EVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGETLEKFKKGEARLMVCSD 317

Query: 303 VAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAIEVL 362
           VAARG+DI  +  V N D+PI AEDYVHRIGRTGRAG +G A ++   D+ + + AIE +
Sbjct: 318 VAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAM 377

Query: 363 TRQTLPRHEEPDFIPEHRVPMTDASGQ----VIKKPKKPKKPKENSAKRGLGRWMDSTEA 418
              T+PR    + +P   + MT   G+      K  K+P + K++ AK    R     EA
Sbjct: 378 IGTTIPR-ISVEGVPALDLDMTARKGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEA 436

Query: 419 ASAEPAVKAVRKVPSFNGGPRKRKP 443
             AE A             PR+ +P
Sbjct: 437 PVAEAAPVEAAAPEEVIERPREERP 461