Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 453 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  273 bits (698), Expect = 8e-78
 Identities = 154/378 (40%), Positives = 232/378 (61%), Gaps = 16/378 (4%)

Query: 2   NFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQ 61
           +F    L + LL  +++  YT PTP+Q K IP  LAG+D++  AQTGTGKTA + LP+L 
Sbjct: 7   SFENFKLNKQLLEAVKEAGYTKPTPIQEKTIPLALAGQDILGIAQTGTGKTAAYVLPLLM 66

Query: 62  RLAL-EGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMR 120
           +    +GE       RAL+L PTREL  Q+   +    +   L    +YGGV   PQ+ +
Sbjct: 67  KTKYAQGEHA-----RALILAPTRELVIQIEQAILTLGKYTDLRYACLYGGVGPTPQIEK 121

Query: 121 LRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKR 180
           +R GVD+++ATPGR +D++ +  +    ++T+V+DEAD+M+D+GF  +++S+   +P KR
Sbjct: 122 IRAGVDIIIATPGRFMDIYSKGELFVRNIKTMVMDEADKMMDMGFMPQIRSILEVIPVKR 181

Query: 181 QTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQ--WLVPVDKKRKADLFCHL 238
           Q +LFSATFS+++  ++   L  P  IE++ +  TA +V Q  + VP + K K  L  HL
Sbjct: 182 QNMLFSATFSERVERISHEFLEFPERIEIALQATTADTVAQTKYFVP-NLKTKITLLDHL 240

Query: 239 LRKQRWKQVLVFAKTRNGVD---QLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREV 295
           L+ +   +V+VF K+R   +   Q +ER     +    IH ++ Q TR  ++D FK+ +V
Sbjct: 241 LQNEEINRVIVFTKSRKNAEAVYQYLERRKHGEIRV--IHANKGQNTRINSVDDFKSGDV 298

Query: 296 QVLVATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQL 355
           ++LVATDVAARGLDI  +  VVN D+P++ EDYVHR+GRTGRA  +G A + V   E   
Sbjct: 299 RILVATDVAARGLDISMVSHVVNFDVPLIYEDYVHRVGRTGRAEQEGAAFTFVNPAEEYH 358

Query: 356 LAAIEVLTRQTLPRHEEP 373
              IE + R  +P  EEP
Sbjct: 359 FGRIEEIIRMEVP--EEP 374