Pairwise Alignments

Query, 304 a.a., Histone deacetylase family protein from Pseudomonas putida KT2440

Subject, 308 a.a., Deacetylases, including yeast histone deacetylase and acetoin utilization protein from Variovorax sp. SCN45

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 21/285 (7%)

Query: 17  AEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDILALAHDRSYIERYMNGELSRED 76
           A H    ++   +HD L+ +GL    A     +     LA AH  S++   +   ++  +
Sbjct: 18  AGHPESPERLSAIHDRLLIAGLLDYMAPYDAPLATQAQLARAHTMSHVRELI--AMAPAE 75

Query: 77  QRRLGLP---WSEALARRTVRAVGGSLLTAEMALQHGIA---CHLAGGTHHAHYDHPAGF 130
             R   P    +    +  +RA G ++L  ++ L        C++    HHA  D   GF
Sbjct: 76  GLRFVDPDTRMNPHTLQAALRAAGAAVLATDLVLAGEAPTAFCNVRPPGHHATRDAAMGF 135

Query: 131 CIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILHDTPEAITVSLHCEQNFPARK 190
           C FN++AV  R+ L+   + RV   D DVH G+G+A I  D    +  S+  +  +P   
Sbjct: 136 CFFNNVAVGIRHALDVHGLKRVARIDFDVHHGNGSADIFRDDGRVLMCSIFEKGLYPFAG 195

Query: 191 AQSDW----DIPLPRGMGDTAYLKVVDDALNYLLPLYQPDLVLYDAGVDVHKDDALGYLQ 246
              D     +I LP   G  A+   V       L  + P LV   AG D H++D +G L 
Sbjct: 196 EDDDGPRMVNIGLPSRSGGDAFRAAVTHHWLPALEAFAPQLVYVSAGFDGHREDDMGNLG 255

Query: 247 LTDAGVA----ARDEAVLRHCLGRDIPVMGVIGGGYSKDRTALAR 287
           L +   A       +  LRHC GR   V+  + GGY+   +ALAR
Sbjct: 256 LVENDYAWVTRKLMDVALRHCGGR---VISSLEGGYA--LSALAR 295