Pairwise Alignments

Query, 797 a.a., Outer membrane ferrichrome-iron receptor from Pseudomonas putida KT2440

Subject, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  343 bits (880), Expect = 2e-98
 Identities = 258/844 (30%), Positives = 417/844 (49%), Gaps = 72/844 (8%)

Query: 12  LSRALHAALLGLAVSTYALPSLA-QPLNADHNNP-LKQWSIPAGPLAPALDRFAREAGIS 69
           L+R LH   L +A++  A+P L  Q  +A+ ++  + ++SIPAG L+ AL+  A +AG+ 
Sbjct: 4   LARPLHPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLV 63

Query: 70  LSFDAQNVANRNTNGVQGALDTRSALSSLLRGTELQIEPQGPNAYLVIPQPKPAGPLELG 129
           L+FDA     + + G+ G  DT  AL+ LL G+ LQ      + Y +   P   G +EL 
Sbjct: 64  LAFDASLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAMELQ 123

Query: 130 VTEDYRLAPVIINAKVKASADDDANSVVAKELWVGGKVATSILNTPASVSVVTNKEMQQR 189
            T        I  A    S     +  VA     G K  T+++ TP S+S+VT  +M+ +
Sbjct: 124 AT-------TISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQ 176

Query: 190 SVSTTEEALQYTPGVVSDYYGSD-DRNDYFLIRGFQATTYRDGLTLSSMRGV--REDPYA 246
           +  +  + L+Y+  V+ +  G+   R D   IRGF   TY DGL + S R    ++D + 
Sbjct: 177 NAESLNQILRYSAAVIPETRGATASRLDQLTIRGFSPATYLDGLRMPSSRDALPQKDAFD 236

Query: 247 YERIEILRGANSTLFGPADPGGSVNFVTKQPRFEKFGQGYVTYGSYDHAETGIDVGDALN 306
            ER+E+LRG  S L+G   P G +N V+K+P    F +  V YG+++   T  D+   ++
Sbjct: 237 LERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMD 296

Query: 307 DEQTLAGRFTAKMQNSDREYDHSQDDNRFVMGGLTWAPTDFTSATVVLDYLKTNSSPNSG 366
           D+   + R      ++D + +H++   + +    TW P D TS T++  + K     + G
Sbjct: 297 DQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYG 356

Query: 367 GYP-----LDKGYDRS---DFY-GEPGYNFHDVERTSLSGNITHDFDNGFTLRSNLRYSE 417
             P     L     RS   DFY GE  +   D E  S+     H FD+ +T+R N RY  
Sbjct: 357 SVPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLR 416

Query: 418 LTDDFGYVYLSDNASRVGTTIPRYVFGTDSDADQLNGNLMLQYDAQFEHIDSSTLVGVEY 477
               +  +Y S+       TI R    +D D D    +  +Q       +  + L+G++Y
Sbjct: 417 SEGQYRSLY-SNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDY 475

Query: 478 LDSTT---KQSSVYSLAPSIDIANPVFTGVPGGITPYTRKKNDATTKA----VFLQQNLS 530
            +++T     S VY+  P++DI NPV+    G   P      D T+++    V+LQ+ + 
Sbjct: 476 QNTSTDTLSGSGVYTAGPTLDIFNPVY----GAAVPVPAYTTDGTSRSEQTGVYLQEQMK 531

Query: 531 FFDRVIATAGVRND--SMDLSSKEYIGGEQTEKDNFSET-SYRAALTYIVNDEVSTYVSM 587
            +D+ +   G R D  S D S++    G +++    S+  + R  L Y+ ++ ++ Y S 
Sbjct: 532 -WDKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASY 590

Query: 588 VESVSPPQVGV-------TPQTGKQYEVGIKYSPMGMDALFSAAVYDLTQENVTIAVVLP 640
            ES + PQ G         P  GKQYE+GIKY P G ++  +AA++DL Q NV      P
Sbjct: 591 AESFN-PQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDP 649

Query: 641 SGIIE----QQTVGESRVRGLDLEAKAQVTQDISVIGAYSYMESEVLRGS---------- 686
           + +      Q   GE + RG +LE KA +  ++ +  AY+Y+++ + + +          
Sbjct: 650 THLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISD 709

Query: 687 LYDGSSLKGNEFTT--APKHTASLWSYYDIPGTDV---SVGLGARYVGAYYMDAANTKKS 741
           +  G ++     TT   P+HTAS W+ Y +    +    VG GARYVG+ + D ANT K 
Sbjct: 710 IGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKV 769

Query: 742 DGTTLFDAALNY---KIAKGTD---LALNVSNLFDEQHVVG--SGTANYYNPGREVTAKV 793
            G TLFDAA++Y    IA+  D   LALN +NL ++++V    S +  +Y   R V A  
Sbjct: 770 PGYTLFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASA 829

Query: 794 SYSW 797
           +Y W
Sbjct: 830 TYQW 833