Pairwise Alignments

Query, 213 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  108 bits (269), Expect = 1e-28
 Identities = 61/205 (29%), Positives = 111/205 (54%), Gaps = 3/205 (1%)

Query: 5   LMMLLNGIPWTIAVTVLAFCVGVVLGFPICALRMSRVKVLSILAAMLVLTLRSIPPIVWL 64
           LM L+  I WT+ ++ +AF +G V GF +   R+S    L   A + +  ++ IP ++ L
Sbjct: 11  LMYLVQAIGWTLVLSAIAFVLGAVGGFGLMLARISPRPWLRWFAVVYIECIQGIPLLILL 70

Query: 65  FFIFFGIGGGYISLSPFTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQ 124
           F ++FG+    +SL    AA + + +  +A++ +++RG   A+P  Q+EA+  L LS  Q
Sbjct: 71  FIVYFGLSVYGLSLPSLVAAGLAMMIYVSAYLGDIWRGCIEAMPKPQWEASECLALSRWQ 130

Query: 125 RFFDVVLPQLVRIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYTA 184
               V++PQ VR+++P +  + + ++K +++AS IG  E++     ++   FQ   V+  
Sbjct: 131 TLRLVIIPQAVRLSLPPTVGFLVQIIKMTSLASVIGFVELTRAGQIINNTIFQPFLVFFL 190

Query: 185 AAVVYLVLSVPVALFSRWLSATLKQ 209
               Y  L  P+   SRW  A  K+
Sbjct: 191 VGAFYFALCYPL---SRWSEAMEKK 212