Pairwise Alignments

Query, 213 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 2e-36
 Identities = 71/195 (36%), Positives = 118/195 (60%)

Query: 2   KDILMMLLNGIPWTIAVTVLAFCVGVVLGFPICALRMSRVKVLSILAAMLVLTLRSIPPI 61
           +D L +LL G   T+ VTVLAF +   LG  +  +++S V+ LS   +++V  +R +P I
Sbjct: 11  QDFLPILLQGAVVTVQVTVLAFLLSSALGLALALMKLSPVRALSWAGSVIVNVIRGLPII 70

Query: 62  VWLFFIFFGIGGGYISLSPFTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLS 121
           V LF+I+F +    + L+ F A V+GLG+  +A+ +E +R    A+  GQ EAA  + + 
Sbjct: 71  VQLFYIYFVLPEFGVQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMR 130

Query: 122 APQRFFDVVLPQLVRIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSV 181
           +      V+LPQ  RIA+P      + +LKDS++ STI V E++     ++  TFQ ++V
Sbjct: 131 SALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTV 190

Query: 182 YTAAAVVYLVLSVPV 196
           YT  A++YL++S+P+
Sbjct: 191 YTLVALLYLLMSLPL 205