Pairwise Alignments

Query, 213 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  109 bits (272), Expect = 4e-29
 Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 1/197 (0%)

Query: 8   LLNGIPWTIAVTVLAFCVGVVLGFPICALRMSRVKVLSILAAMLVLTLRSIPPIVWLFFI 67
           LL+G   T+ +TVL   V V LG  +  +R+S  K LS  + + V   R++P I+ +++ 
Sbjct: 15  LLHGAGLTVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVEFFRNLPLILVVYWA 74

Query: 68  FFGIGG-GYISLSPFTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQRF 126
           F+ +    +I  S FT  +V L L  +A+ +E +R    +I  GQ EAA  + +S  Q  
Sbjct: 75  FYVMPVLMHIEFSAFTTGLVALCLNVSAYNAETFRAGINSIRKGQMEAAIAMGMSRWQAM 134

Query: 127 FDVVLPQLVRIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYTAAA 186
             VV+PQ  R  +P  A+  + L KD+++ S I VGE++  A Q+   +F+ L + TA A
Sbjct: 135 KKVVIPQAWRRVLPVLASTWVSLFKDTSLVSVIAVGELAHVALQIRSSSFRVLEMLTAMA 194

Query: 187 VVYLVLSVPVALFSRWL 203
           V+Y ++  P A    W+
Sbjct: 195 VIYWLMGYPQAKLVDWI 211