Pairwise Alignments

Query, 219 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  117 bits (292), Expect = 2e-31
 Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 2/209 (0%)

Query: 7   MWMQWLPELWKGFVLSMQVTAVSLGLGVVLGLLLALGVSSPSR-WLRYPSLVVVELGRGA 65
           +W  W P+L +G ++++++TA +L LG VLGLL+ +G  +P R W+       V   RG 
Sbjct: 8   VWQGW-PDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAIRGT 66

Query: 66  PALILLQYFYFGLPSVNLTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAAEVI 125
           P L+ L   +FGLP   + L +F    L +   + AY SEI+RG I+S+  GQT AA+ +
Sbjct: 67  PLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSL 126

Query: 126 GLNRFDALRFVILPQALRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSSTFEY 185
           G+    A+R ++LPQA+   +P L    I + + S+L   + + +++     I S ++  
Sbjct: 127 GMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRS 186

Query: 186 MPVLILAGLMYAAVCAPATLGVAALEKRL 214
           + V +   ++Y  +    TL +   E++L
Sbjct: 187 LEVYLAIAVVYFVLTGTMTLILRHFEQKL 215