Pairwise Alignments

Query, 219 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  118 bits (295), Expect = 1e-31
 Identities = 64/202 (31%), Positives = 109/202 (53%), Gaps = 1/202 (0%)

Query: 18  GFVLSMQVTAVSLGLGVVLGLLLALGVSSPSRWLRYPSLVVVELGRGAPALILLQYFYFG 77
           G   ++  T V + LG+ +GL+  LG  S + W+  P    +E+ R  P L+ L +FY+ 
Sbjct: 62  GLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIEVFRCTPVLVQLVWFYYA 121

Query: 78  LPSVN-LTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAAEVIGLNRFDALRFV 136
           LP +  L +++  AA L ++    A+ SEI+RGGI S+  GQ EAA  +G+ R   +R +
Sbjct: 122 LPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQVEAARALGMTRMQLMRRI 181

Query: 137 ILPQALRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSSTFEYMPVLILAGLMY 196
           +LPQA +  +P L+  SIM  + +SL   +A+P+++ +   I   T+  + +     + Y
Sbjct: 182 VLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIAHETYRPLELYTFIAVAY 241

Query: 197 AAVCAPATLGVAALEKRLAPSQ 218
            AV  P T+    +E    P +
Sbjct: 242 FAVLLPVTIWAKRMELGAGPKE 263