Pairwise Alignments

Query, 219 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  128 bits (321), Expect = 9e-35
 Identities = 74/193 (38%), Positives = 111/193 (57%)

Query: 22  SMQVTAVSLGLGVVLGLLLALGVSSPSRWLRYPSLVVVELGRGAPALILLQYFYFGLPSV 81
           ++ ++A++  LG V G  L L   SP  WLR+ ++V +E  +G P LILL   YFGL   
Sbjct: 21  TLVLSAIAFVLGAVGGFGLMLARISPRPWLRWFAVVYIECIQGIPLLILLFIVYFGLSVY 80

Query: 82  NLTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAAEVIGLNRFDALRFVILPQA 141
            L+L S  AA LAM    +AY  +I RG IE++   Q EA+E + L+R+  LR VI+PQA
Sbjct: 81  GLSLPSLVAAGLAMMIYVSAYLGDIWRGCIEAMPKPQWEASECLALSRWQTLRLVIIPQA 140

Query: 142 LRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSSTFEYMPVLILAGLMYAAVCA 201
           +R++LP  +GF + + + +SL   I   E+      I ++ F+   V  L G  Y A+C 
Sbjct: 141 VRLSLPPTVGFLVQIIKMTSLASVIGFVELTRAGQIINNTIFQPFLVFFLVGAFYFALCY 200

Query: 202 PATLGVAALEKRL 214
           P +    A+EK+L
Sbjct: 201 PLSRWSEAMEKKL 213