Pairwise Alignments

Query, 219 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  142 bits (357), Expect = 7e-39
 Identities = 84/205 (40%), Positives = 116/205 (56%)

Query: 11  WLPELWKGFVLSMQVTAVSLGLGVVLGLLLALGVSSPSRWLRYPSLVVVELGRGAPALIL 70
           +LP L +G V+++QVT ++  L   LGL LAL   SP R L +   V+V + RG P ++ 
Sbjct: 13  FLPILLQGAVVTVQVTVLAFLLSSALGLALALMKLSPVRALSWAGSVIVNVIRGLPIIVQ 72

Query: 71  LQYFYFGLPSVNLTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAAEVIGLNRF 130
           L Y YF LP   + LT+F A  + +    +AY +E  R GIE+V  GQ EAA+ +G+   
Sbjct: 73  LFYIYFVLPEFGVQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRSA 132

Query: 131 DALRFVILPQALRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSSTFEYMPVLI 190
             +R VILPQA R+ALP      +MM + SSL  TI + E+      I SSTF+ M V  
Sbjct: 133 LIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVYT 192

Query: 191 LAGLMYAAVCAPATLGVAALEKRLA 215
           L  L+Y  +  P   G+  LEKR A
Sbjct: 193 LVALLYLLMSLPLVYGLRRLEKRFA 217