Pairwise Alignments

Query, 219 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 223 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  117 bits (294), Expect = 1e-31
 Identities = 68/197 (34%), Positives = 113/197 (57%)

Query: 18  GFVLSMQVTAVSLGLGVVLGLLLALGVSSPSRWLRYPSLVVVELGRGAPALILLQYFYFG 77
           G + ++ ++ ++   G ++G  +AL   SP R +R+ ++  ++L +G P L++L   YFG
Sbjct: 17  GVLWTVCLSVIAFIGGGLVGGAVALCRISPVRAVRWAAIAWIQLIQGTPLLVVLFVCYFG 76

Query: 78  LPSVNLTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAAEVIGLNRFDALRFVI 137
           L  + L L    AA++AM    +AY  EI RG IESV   Q EAAE + L+R   +R V+
Sbjct: 77  LSIMGLELPGLVAASIAMVIYVSAYLGEIWRGCIESVPRTQWEAAECLALSRSQRMRLVV 136

Query: 138 LPQALRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSSTFEYMPVLILAGLMYA 197
           LPQALR+A P  +GF + + + +SL   +   E+V     I +S F+   + ++   +Y 
Sbjct: 137 LPQALRIATPPTVGFMVQIVKNTSLASIVGFVELVRAGQLINNSIFQPFLIYLIIAALYF 196

Query: 198 AVCAPATLGVAALEKRL 214
           A+C P ++    LE+RL
Sbjct: 197 AMCFPLSVWSRRLEQRL 213