Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 12/186 (6%)

Query: 3   LCSTLAGAPYALAECTPANQFETITPGVLTVAAYVFPPYSIPGPNNQLSGVDGEIIKRIA 62
           L ST+  A   L  CT A      T  + +  AY  PP++    NN+L G D +I   + 
Sbjct: 4   LTSTITTATLWLL-CTVAGAAHAETLRIASEGAY--PPFNYVDSNNRLHGFDIDIANALC 60

Query: 63  ERECLKVKTMVVDTAAVVQAVVAKRADVGIGDWYRTAERSKALGLSAPLYLDVM--GIIS 120
           ER  +    +  D   ++ A++AK+ D  +     T ER K +  +   Y   +   +  
Sbjct: 61  ERMKVNCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAH 120

Query: 121 DEGYTKI-SELDGKRIGTVQGY----LWVDDLKKAFGDNLVLYPNPVAMAQDLTSRRIQ- 174
           D G +   +   G  +G  Q Y    ++ ++     G  + LYP+    A DL + R+  
Sbjct: 121 DSGISDAQTNFKGLTVG-AQSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDG 179

Query: 175 VGADSF 180
           V AD +
Sbjct: 180 VIADKY 185