Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 260 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 50.1 bits (118), Expect = 5e-11
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 13/215 (6%)

Query: 47  NNQLSGVDGEIIKRIAERECLKVKTMVVDTAAVVQAVVAKRADVGIGDWYRTAERSKALG 106
           +N + GV  ++ + + +      +    + AA++ ++ + + D       +T ER+K + 
Sbjct: 50  SNSIQGVMVDVAEAVGKAGGFTSQIEQTNFAALIPSLTSGKLDFISAGMLKTEERTKVVD 109

Query: 107 LSAPLYLDVMGII----SDEGYTKISELDGKRIGTVQGYLWVDDLKK-AFGDNLVLYPNP 161
            SAP+Y    G+I     +  Y  +  L  + +G   G ++ D L K      +  Y + 
Sbjct: 110 FSAPVYAYGEGLIINADDNAAYPDLMPLKDQVVGVQAGTIFYDQLNKLGIFKEIRTYDSI 169

Query: 162 VAMAQDLTSRRIQVG-ADSFAVAVSSQQKGGYPGKSIKVSEPDQRVKATLEPGQSAFPYT 220
             M +DL+  RI+    D   VA   +QK     K +K++ PD         G+      
Sbjct: 170 GEMVRDLSLGRIKAAVGDQPVVAYQIRQK---LFKGVKLA-PDY---TPSNVGEVCLVVR 222

Query: 221 KANAALGEALGKNIQALHASGEIAEILASFGLDRE 255
           K +A   E L   I ++ A G +  IL  +GLD +
Sbjct: 223 KGDAQTLERLNTAIASIKADGTLDSILKKWGLDTQ 257