Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 284 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 6/163 (3%)

Query: 28  PGVLTVAAYVFPPYSIPGPNNQLSGVDGEIIKRIAERECLKVKTMVVDTAAVVQAVVAKR 87
           P V  VAA  +PP+++ G N Q SG + ++I ++ E    + +   V    ++ +++AK+
Sbjct: 28  PIVFAVAAEPYPPFTVKGGNGQWSGFEVDLIHKLCEGMKAECQIKEVAWDGIIPSLLAKK 87

Query: 88  ADVGIGDWYRTAERSKALGLSAPLYLDVMGIISDEG-YTKISE--LDGKRIGTVQGYLWV 144
            DV       T ER K +  S   Y  ++G+   +G   +IS   L GK IG     +  
Sbjct: 88  IDVIFSSMSVTDEREKQIAFSRAYYDSLLGVAGPKGSEVEISPAGLKGKLIGVQISTVSA 147

Query: 145 DDLKKAFGD--NLVLYPNPVAMAQDLTSRRIQ-VGADSFAVAV 184
           + LKK + +  +L  Y    +   DL + RI  + AD  A+A+
Sbjct: 148 NYLKKYYENIADLKYYDTQESANADLIAGRIDYMMADDTAIAM 190