Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 55/218 (25%), Positives = 83/218 (38%), Gaps = 17/218 (7%)

Query: 38  FPPYSIPGPNNQLSGVDGEIIKRIAERECLKVKTMVVDTAAVVQAVVAKRADVGIGDWYR 97
           + P+     +  L G D ++   I     +K K +  D   ++  + A + D  I     
Sbjct: 36  YAPFESKAADGSLVGFDIDLGNAICAELKVKCKWVESDFDGMIPGLKANKFDGVISSMTV 95

Query: 98  TAERSKALGLSAPLYLDVMGIISDEG--YTKISELDGKRIGTVQGYLWVDDLKKAF---G 152
           T  R KA+  S+ L+     ++  +G  Y+    L GK +G  QG +     K      G
Sbjct: 96  TPVREKAIDFSSELFSGPTSLVFKKGAGYSTPESLKGKSVGYEQGTIQEAYAKAVLDKAG 155

Query: 153 DNLVLYPNPVAMAQDLTSRRIQVGADSFAVA----VSSQQKGGYPGKSIKVSEPDQRVKA 208
                Y N   +  DLTS R+         A    + S    GY   S  + +P      
Sbjct: 156 VTTKAYANQDQVYADLTSGRLDASVQDMLQAELGFLKSPAGAGYE-VSAAIDDP------ 208

Query: 209 TLEPGQSAFPYTKANAALGEALGKNIQALHASGEIAEI 246
            L P ++A    K N  L   L K I+ALH  G  A I
Sbjct: 209 -LLPSKTAIGIKKGNTELKTLLDKGIKALHDDGTYATI 245