Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 273 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola ME23

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 16/228 (7%)

Query: 38  FPPYSIPGPNNQLSGVDGEIIKRIAERECLKVKTMVVDTAAVVQAVVAKRADVGIGDWYR 97
           +PP+S     NQL G D ++   +A++   K++        +V      R D+ I     
Sbjct: 44  YPPFSYLDDKNQLVGFDVDVANAVAQKLGAKLELATPGWETIVGGKWQGRWDMCICSMTP 103

Query: 98  TAERSKALGLSAPLYLDVMGIIS---DEGYTKISELDGKRIGTVQGYLWVDDLKKAF--- 151
            AER+K L  +AP Y     +I+   ++     ++L  K++G   G  + + L K+    
Sbjct: 104 NAERAKVLDFAAPYYSTFAVLIAHKDEKNIQSAADLSNKKVGLGLGSSYENYLNKSLVIP 163

Query: 152 GDNLVLYP----NPVAMAQDLTSRRIQVGADSFAVAVSSQQKGGYPGKSIKVSE-PDQRV 206
           G   + +P      V   +D+  R + +G      AV S +    P    ++ + P  R+
Sbjct: 164 GGKPIAFPFDHVQAVPTDEDMAFRNLALGPGKRLDAVISDRITAKP----RIEKLPQLRI 219

Query: 207 KATLEPGQSAFPYTKANAALGEALGKNIQALHASGEIAEI-LASFGLD 253
              L    +     K +    + L   I AL A G +  I +  FG D
Sbjct: 220 LQELYAEPNWIAVDKGDPEWSKTLADAIAALRADGTLKTISMKWFGED 267