Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 286 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 49.7 bits (117), Expect = 7e-11
 Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 28/259 (10%)

Query: 8   AGAPYALAECTPA-NQFETITPGVLTVAAY-VFPPYSIPGPNNQLSGVDGEIIKRIAERE 65
           AGA  A  +CTP  +    I PG L +A     PP +       L G+  E+   IA+R 
Sbjct: 28  AGAAVA-QDCTPKISDDHLIKPGHLVMATSPTLPPMAYADQQGVLKGLRIELGYEIAKRL 86

Query: 66  CLKVKTMVVDTAAVVQAVVAKRADVGIGDWYRTAERSKALGLSAPLYLDV---MGIISDE 122
           CLK + +  + A +V  +   R D+     + TAER K L +     L +     + + +
Sbjct: 87  CLKPEYISTEYATMVPGLQGGRWDMINAGLFVTAERRKILFMIPYENLAISISTAVGASD 146

Query: 123 GYTKISELDGKRIGT-VQGYL--WVDDLKKAFGD------NLVLYPNPVAMAQDLTSRRI 173
             TKI +L GK + T + GY    + +L + F         + L+ N   + Q L + ++
Sbjct: 147 PITKIDDLAGKAVSTDIGGYAERKIKELNEDFKKRGLAPMTINLFDNYATVYQALRAGQV 206

Query: 174 QVGADSFAVAVSSQQKGGYPGKSIKVSEPDQRVKATLEPGQSAFPYTKANAALGEALGKN 233
           Q       VA   Q +G +   ++    P         PG  +F     +  + +A+   
Sbjct: 207 QAAVSIDPVAKQYQDRGEFT-HALSGMYP--------TPGSLSF----GSKDVADAVSAA 253

Query: 234 IQALHASGEIAEILASFGL 252
           ++ + A G + +++  +G+
Sbjct: 254 LKEMRADGSLEKLMGGYGV 272