Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 391 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  220 bits (561), Expect = 6e-62
 Identities = 134/393 (34%), Positives = 211/393 (53%), Gaps = 18/393 (4%)

Query: 126 VGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCETAPVTADKPAQLIEKSMASPSVLAMLLT 185
           VGE  SE+LD++P +  V +H+   + CR C+        P Q+I+  M +  ++A  + 
Sbjct: 4   VGEDVSERLDVIPAEFFVHRHIYGKWACRCCQCLVQEPAAP-QIIDGGMPAAGLVAHTMV 62

Query: 186 TKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRDRLLESPVIHCDE 245
           + +VD LP +R E++  R G+  PR TLA W  +      PL +  +  +L + V+H DE
Sbjct: 63  SHFVDHLPYYRLESINARSGVHTPRSTLASWSGRGGAALVPLYDAHKRFVLSAAVLHADE 122

Query: 246 TRVQVLKEPDRDPTSQSWMWVQASGPPDRQV-VLFDYTTSRAQEVPLRLL---------E 295
           T V +L +P    T ++++W  A G  D    V++D+   R  + P+  L          
Sbjct: 123 TPVAML-DPGAGKTKRAYVWTYARGAFDAVPGVIYDFCAGRGAQYPVAFLGPEDDRRSDP 181

Query: 296 GYRGYVMTDDYAGYN-ALALQPGVERLACMAHVRRKFVEAQKVQPKGKSGRADVALTMIN 354
           G+RG ++ D+YA Y+  +  QPG     C+AH RRK+ E   ++  GKS  AD AL  I 
Sbjct: 182 GWRGTLVRDEYAAYDKVMVAQPGRIPAGCLAHARRKYDEL--LRDAGKSAVADEALRRIA 239

Query: 355 KLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGKAVLYLANNW 414
           ++Y +ER+L   + ++R   RQ  + P+ E L SWL     +V   S   KA+ Y  N W
Sbjct: 240 QIYRLERELAALTSQERLTRRQRDAKPLWEDLHSWLRLERGRVPDGSATAKALNYSLNAW 299

Query: 415 NRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNGQ 474
           + L + +  G + +DNN  E  I+P+  GR+AWLF+ +      +A + SLV +AK+ G 
Sbjct: 300 SALTQNLLDGDVNVDNNHCENLIRPWAQGRRAWLFAGSELAGQRAAVVMSLVRSAKLQGH 359

Query: 475 EPYTWLRHVLERLP-HASSVADYEALLPWNCSP 506
           +P+ +L+ VL RLP H +S  D   LLP N  P
Sbjct: 360 DPWAYLKDVLTRLPTHLNSRID--ELLPHNWRP 390