Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 510 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  284 bits (727), Expect = 5e-81
 Identities = 181/520 (34%), Positives = 278/520 (53%), Gaps = 27/520 (5%)

Query: 1   MISVPDNLPDDPAA-LKLLLAQLLAERTVDKGQIVDLKEQVKLLRDRLFNRKSEQTVESN 59
           M+  P +L    A  L+ L A+L+ +       +  L  +  LL+   F  +SE+    N
Sbjct: 1   MVVEPQSLDSLSAEQLRELTARLMVQVRHQSALLEKLTHENALLKRMKFAAQSERF---N 57

Query: 60  TPQLALF-NEPESQWVPTADDAD-----EEVVAPSKQRGKRKPLSADLPRIEVIHDLPEH 113
             Q +L  +E E+     A + D     +    P K++ KR PL A LPR EV H+    
Sbjct: 58  PEQKSLLEDEIEADLAAVASEIDALTQTQAPATPDKKQAKRLPLPAHLPRREVRHE--PA 115

Query: 114 ELTCACGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCETAPVTADKPAQLIEKS 173
             TCACGC+   VGE  +E+LD +P    V +H+R  + C  CE+    A   A +I+K 
Sbjct: 116 STTCACGCQMKRVGEDVAEKLDYMPGVFSVERHIRGKWACARCESI-TQAPVEAHVIDKG 174

Query: 174 MASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRD 233
           + +  +LA +L  KY D LPL+R E +  R G+ IPR TLA+WV  C    QPL++ ++ 
Sbjct: 175 IPTTGLLAQVLVGKYADHLPLYRQEAIFGRAGLAIPRSTLAQWVGTCGVRLQPLVDALKT 234

Query: 234 RLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGPPDR-QVVLFDYTTSRAQEVPLR 292
            +L   V+H DET V +LK P    T ++++W  A G  +  + V++D+  SR+ E    
Sbjct: 235 EILGHRVLHADETPVAMLK-PGDGKTHRAYLWAYAPGAFESIKAVVYDFCESRSGEHARH 293

Query: 293 LL-----EGYRGYVMTDDYAGYNALALQPGVERLACMAHVRRKFVEAQKVQPKGKSGRAD 347
            L     + ++G +  DD++GY AL +  GV  + C+AH RRKF +   +    +S  A+
Sbjct: 294 FLGHGTDKAWKGSLTCDDFSGYKAL-IASGVTEVGCLAHARRKFFD---LHAANQSQIAE 349

Query: 348 VALTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGKAV 407
            AL    ++Y IER++K+   EQR   RQ+++ PIL+ L  W+     QV   S   KA+
Sbjct: 350 FALQQFARVYEIEREVKELGSEQRQAVRQQQTRPILDALHEWMTLQRRQVPDGSATAKAL 409

Query: 408 LYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVE 467
            Y    W+ L R+ + G LP+DNN  E  I+P  IGR  WLF+ + +    +A + SL++
Sbjct: 410 DYSLRRWDALTRFADDGQLPVDNNWIENQIRPIAIGRNNWLFAGSLRAGQRAAAVMSLIQ 469

Query: 468 TAKVNGQEPYTWLRHVLERLP-HASSVADYEALLPWNCSP 506
           +A++N  +PY +L+ VL RLP H +S  D   LLP    P
Sbjct: 470 SARMNEHDPYAYLKDVLTRLPTHKASRID--ELLPHRWQP 507