Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 524 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  238 bits (606), Expect = 5e-67
 Identities = 170/509 (33%), Positives = 251/509 (49%), Gaps = 27/509 (5%)

Query: 8   LPDDPAALKLLLAQLLAERTVDKGQIVDLKEQVKLLRDRLFNRKSEQTVESNTPQLALFN 67
           L ++ AA ++ LA+L   +     +I  L+  +K      F  +SEQ    +  QL L  
Sbjct: 25  LAEERAAAEVRLAELNVAKGEADVEIERLQSIIKAFMRHRFGSRSEQL---DADQLQLGL 81

Query: 68  EPESQWVPTADDADEEVVAPSK----QRGKRKPLSADLPRIEVIHDLPEHELTCACGCRK 123
           E     +  A  A E V   S+    ++  R  L A L RIE I DL +    C C    
Sbjct: 82  EDVEIALGHARAAREAVAPRSRGDQPRKTNRGSLPAHLERIEQIVDLDDKACPC-CKGPL 140

Query: 124 HVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCETAPVTADKPAQLIEKSMASPSVLAML 183
           H +GE  +E+LD+VP   RVL   R  YGCR CE A V A  PA++IE  + + +++A +
Sbjct: 141 HQIGEDVAERLDVVPTTFRVLVTRRPRYGCRSCEGAIVQAPAPARIIEGGIPTEALIAQV 200

Query: 184 LTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRDRLLESPVIHC 243
           L +KY D +PL+R   +  R  I + R TLA WV + + + +PL +   + L  S  +  
Sbjct: 201 LVSKYADHVPLYRQAQIYARQDIRLDRSTLADWVGRAAWYLRPLRDRTLEELRRSKRLFA 260

Query: 244 DETRVQVLKEPDRDPTSQSWMWVQA--------SGPPDRQVVLFDYTTSRAQEVPLRLLE 295
           DET   VL +P R  T    +W  A        +GPP   +V + Y   R  E P   L 
Sbjct: 261 DETTAPVL-DPGRGRTKTGQLWAYARDDRPCGGAGPP---MVAYIYAADRKAERPDIHLG 316

Query: 296 GYRGYVMTDDYAGYNALALQPGVE-RLA-CMAHVRRKFVEAQKVQPKGKSGRADVALTMI 353
            + G +  D Y GY ALA + G +  LA C +HVRRKF +     P      A   L  I
Sbjct: 317 DFAGILQVDGYGGYTALAKRRGQQLSLAFCWSHVRRKFYDLAASSPV-----ATEILRRI 371

Query: 354 NKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGKAVLYLANN 413
             LY IE +++ ++ EQR + R ERS  I+E LK +LD    Q++ +S L +A+ Y  + 
Sbjct: 372 AMLYAIEDEVRGSAAEQRRLQRAERSRIIVEDLKLYLDGRLRQISAKSKLAEAIRYATSR 431

Query: 414 WNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNG 473
           W  L R+++ G + +D N  ER+I+P  + RK  LF+ + +G    A I +L+E  K+  
Sbjct: 432 WAGLVRFIDDGRIELDTNTVERSIRPLALNRKNALFAGSDEGGDNWAVIATLIENCKLGA 491

Query: 474 QEPYTWLRHVLERLPHASSVADYEALLPW 502
             P  WL   L  L +         L+PW
Sbjct: 492 INPNDWLTQTLTALANGHPANRVHELMPW 520