Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

Subject, 485 a.a., type I restriction-modification system subunit M from Rhodanobacter sp000427505 FW510-R12

 Score =  603 bits (1554), Expect = e-177
 Identities = 299/488 (61%), Positives = 358/488 (73%), Gaps = 4/488 (0%)

Query: 1   MSISSTIKSIQDIMRKDVGVDGDAQRIGQLVWLLFLKIFDDRELEWELMDDNYKSPIPDS 60
           MS  ST+KSIQD+MR+DVGVDGDAQR+ QL W+ FLKI DD++ + ELM D + SPIP  
Sbjct: 1   MSPRSTVKSIQDLMRQDVGVDGDAQRLSQLCWMFFLKIIDDQDQQLELMQDGFTSPIPPR 60

Query: 61  CRWRTWAADPEGMTGDALKDFIDNNLFPQLQNLHEYSNTPS-AFVVRSVFEDAYNYMKSG 119
            +WR WAADPEG TGD L  F++++L P L+ L       + A V+RS+F DAYNYMKSG
Sbjct: 61  LQWRNWAADPEGDTGDTLMAFVNDDLIPALKELPALGKQANRARVIRSLFGDAYNYMKSG 120

Query: 120 QLLRQVINKIQEGVDFNRAQERHEFGNLYEQLLRDLQNAGNAGEFYTPRPVTEFMVRMVD 179
            L+RQVINKI   VDFN   ER  FG +YEQLL DLQNAGNAGE+YTPR VT FMV  +D
Sbjct: 121 HLMRQVINKINT-VDFNDLAERKHFGEVYEQLLNDLQNAGNAGEYYTPRAVTAFMVDRID 179

Query: 180 PKLAEKVMDPACGTGGFLTCAIEHKRRRYVKTAEDERTLQASIFGVEKKPLPHLLATTNM 239
           P   EK+ DPACGTGGFLTCAI H R  YVK+  DE  LQA +  VEKKPLPH+L  TNM
Sbjct: 180 PHPGEKLFDPACGTGGFLTCAIRHMRDHYVKSVADEEALQAGLRAVEKKPLPHMLCVTNM 239

Query: 240 ILHGIEVPSQIRHDNTLSKPLISWGPSERVHCIVANPPFGGMEEDGIETNFPAAFRTRET 299
           +LHGIE PS ++HDNTL++P ISW   ERV  I+ANPPFGG EEDGIE+NFPA FRT+ET
Sbjct: 240 LLHGIEDPSFVQHDNTLARPYISWEQKERVDIILANPPFGGKEEDGIESNFPAHFRTKET 299

Query: 300 ADLFLVLIMQLLKDGGRAAVVLPDGFLFGEGIKSRIKEKLLTECNLHTIVRLPNGVFNPY 359
           ADLFL L ++LLK GGRAA+VLPDG LFGEG+K+R+KE LL EC+LHTIVRLPN VF PY
Sbjct: 300 ADLFLALFIRLLKPGGRAAIVLPDGSLFGEGVKTRLKEHLLEECSLHTIVRLPNSVFKPY 359

Query: 360 TGIKTNLLFFTKGTPTKQVWFYEHQYPAGVKNYSKTRPMRIEEFAVEEAWWGSEADGFAA 419
             I TNLLFF KG+PT+ +W+YEH+ P G K YS TRP++IE       WWG        
Sbjct: 360 ASIGTNLLFFEKGSPTQDIWYYEHRVPEGQKAYSMTRPIKIEHLQDCVDWWGGACR--EG 417

Query: 420 RAENAFAWQVSVEELQARNWNLDCKNPHTGEQVSHDPDELLRNYASVQDEISDLRDQLKA 479
           R E   AW+V+ +E++AR +NLD KNPHT  +   DP  LL    + + E + LRDQLKA
Sbjct: 418 RVETPQAWKVTADEVKARGYNLDIKNPHTEAEDHGDPKALLAELDAAEAETARLRDQLKA 477

Query: 480 VLAEALRR 487
           +LAEAL R
Sbjct: 478 ILAEALAR 485