Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

Subject, 529 a.a., Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  162 bits (409), Expect = 3e-44
 Identities = 127/435 (29%), Positives = 204/435 (46%), Gaps = 42/435 (9%)

Query: 70  PEGMTGDALKDFIDNNLFPQLQNLHEYSNTPSAFVVRSVFEDAYNYMKSGQLLRQVINKI 129
           PEG   D LK  I  +     +NL     +    +V++VF +    ++  + L ++++ +
Sbjct: 51  PEGYRWDDLKSRIGQDQMQFYRNLLVQLGSDEKKLVQAVFHNVSTTIEQPKQLTELVSYM 110

Query: 130 Q--EGVDFNRAQERHEFGNLYEQLLRDLQNA--GNAGEFYTPRPVTEFMVRMVDPKLAEK 185
              +  + N  + R +FG++YE LL+   N     AG+++TPRP+ + ++ ++ P+  E 
Sbjct: 111 DALDWYNGNHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREV 170

Query: 186 VMDPACGTGGFLTCAIEHKRRRYVKTAEDERT----------LQASIFGVEKKPLPHLLA 235
           V DPA GT GFL  A      RYVK+  ++            +  +  G+E  P    LA
Sbjct: 171 VQDPAAGTAGFLIEA-----DRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 225

Query: 236 TTNMILHGIEVP----SQIRHDNTLSKPLISWGPS-ERVHCIVANPPFGGMEEDGIETNF 290
             N +LH IE        IR  NTL     S G +  + H +  NPPFG      I   F
Sbjct: 226 LMNCLLHDIEGNLDHGGAIRLGNTLG----SDGENLPKAHIVATNPPFGSAAGTNITRTF 281

Query: 291 PAAFRTRETADLFLVLIMQLLKDGGRAAVVLPDGFLFGEGIKSRIKEKLLTECNLHTIVR 350
                 ++    F+  I++ L  GGRAAVV+PD  LF  G  + I+  L+ +C+LHTI+R
Sbjct: 282 VHPTSNKQLC--FMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILR 339

Query: 351 LPNGVFNPYTGIKTNLLFFTKGTPTK---------QVWFYEHQYPAGVKNYSKTRPMRIE 401
           LP G+F    G+KTN+LFFTKGT T           VW Y+ +    + ++ K  P   +
Sbjct: 340 LPTGIFYA-QGVKTNVLFFTKGTVTNPHQDKNCTDDVWVYDLR--TNMPSFGKRTPFTEQ 396

Query: 402 EFAVEEAWWGSEADGFAARAENAFAWQVSVEELQARNWNLDCKNPHTGEQVSHDPDELLR 461
                E  +G +  G + R E  +++     E+     N +        +      E +R
Sbjct: 397 HLQPFETVYGEDPHGLSPREEGEWSFNAEESEVADSEENKNTDQHQATSRWRKFSREWIR 456

Query: 462 NYASVQDEISDLRDQ 476
           +  S   +IS L+D+
Sbjct: 457 SAKSDSLDISWLKDK 471