Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

Subject, 570 a.a., N-6 DNA methylase from Dickeya dianthicola 67-19

 Score =  146 bits (368), Expect = 2e-39
 Identities = 121/455 (26%), Positives = 198/455 (43%), Gaps = 86/455 (18%)

Query: 3   ISSTIKSIQDIMRKDVGVDGDAQRIGQLVWLLFLKIFDD----RELEWELMDDNYKSP-- 56
           + S IK + D      G+      I Q+ +LLF+K  D+    R+ + +   + Y S   
Sbjct: 8   LQSAIKRLWDKFWSG-GISNPLTAIEQITYLLFMKRLDELDQKRQADADFTGEKYTSKFE 66

Query: 57  ---IPDSCRWRTWAADPEGMTGDALKD--------------------------FIDNNLF 87
              IP   R R  A D +      L+D                           +   +F
Sbjct: 67  GSWIPPEYRARREAKDTDAEWAKKLEDEKRYQIEKRTLRWSEFKRKQAEEMLQHVQGKVF 126

Query: 88  PQLQNLHEYSNTPSAFVVRSVFEDAYNYMKSGQLLRQVINKIQEGVDFNRAQERHEF--- 144
           P L++L+   +  +  +  +VF      +    LL + +  I +  +      R +    
Sbjct: 127 PFLKDLNGAESNFTHHMKNAVF-----IIPKPALLVEAVKTIDDIFEIMERDSREKGQAF 181

Query: 145 ----GNLYEQLLRDLQNAGNAGEFYTPRPVTEFMVRMVDPKLAEKVMDPACGTGGFLTCA 200
               G++YE LL ++  AG  G+F TPR + + M  +V P+L ++++DPACGTGGFL  A
Sbjct: 182 QDIQGDVYEFLLSEIATAGKNGQFRTPRHIIKLMADLVRPQLGQRIVDPACGTGGFLLGA 241

Query: 201 IEHKRRRYV-----------------------KTAEDERTLQASIFGVEKKPLPHLLATT 237
            ++   +                          T + +  +Q S++G +       L   
Sbjct: 242 YQYIVTQLAIKDGKQDLAPDEDGFARTSVAAGLTRKTQLIVQESLYGYDIDATMVRLGLM 301

Query: 238 NMILHGIEVPSQIRHDNTLSKPLISWGPSERVHCIVANPPFGGMEEDGIETNFPAAFRTR 297
           N+++HGI+ P  I + +TLSK    +        ++ANPPF G  + G + N      T 
Sbjct: 302 NLMMHGIDEP-HIDYQDTLSK---GYNEEASYDIVLANPPFTGSIDKG-DINENLQLATT 356

Query: 298 ETADLFLVLIMQLLKDGGRAAVVLPDGFLFGEGIKSR-IKEKLLTECNLHTIVRLPNGVF 356
           +T  LF+  I +LLK GG A V++P G LF      R +++ L+  C+L  ++ +P+GVF
Sbjct: 357 KTELLFVENIYRLLKKGGTAGVIVPQGVLFSSAKAFRDLRQTLVERCDLKAVITVPSGVF 416

Query: 357 NPYTGIKTNLLFFTK---------GTPTKQVWFYE 382
            PY G+ T +L FTK            T  VWFYE
Sbjct: 417 KPYAGVSTAILLFTKVWGPKDKVTKPATGHVWFYE 451